Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX6Q9UNH7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
SNX6Q9UNH7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX6Q9UNH7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.43■□□□□ 0.86
SNX6Q9UNH7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX6Q9UNH7 AC110285.6-201ENST00000617652 491 ntBASIC20.43■□□□□ 0.86
SNX6Q9UNH7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX6Q9UNH7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX6Q9UNH7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX6Q9UNH7 RASA4CP-201ENST00000424092 1398 ntBASIC20.43■□□□□ 0.86
SNX6Q9UNH7 SLC25A24-204ENST00000569674 2357 ntBASIC20.43■□□□□ 0.86
SNX6Q9UNH7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX6Q9UNH7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
SNX6Q9UNH7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 AF106564.1-201ENST00000607058 2553 ntBASIC20.41■□□□□ 0.86
SNX6Q9UNH7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX6Q9UNH7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 MIR939-201ENST00000401314 82 ntBASIC20.4■□□□□ 0.86
SNX6Q9UNH7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 AC091305.1-201ENST00000479476 895 ntBASIC20.4■□□□□ 0.86
SNX6Q9UNH7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 AF213884.3-201ENST00000563833 479 ntBASIC20.4■□□□□ 0.86
SNX6Q9UNH7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX6Q9UNH7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX6Q9UNH7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.39■□□□□ 0.86
SNX6Q9UNH7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.39■□□□□ 0.86
SNX6Q9UNH7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX6Q9UNH7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.39■□□□□ 0.86
SNX6Q9UNH7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.39■□□□□ 0.86
SNX6Q9UNH7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX6Q9UNH7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.39■□□□□ 0.85
SNX6Q9UNH7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNX6Q9UNH7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNX6Q9UNH7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX6Q9UNH7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX6Q9UNH7 MIR572-201ENST00000384983 95 ntBASIC20.39■□□□□ 0.85
SNX6Q9UNH7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX6Q9UNH7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.39■□□□□ 0.85
SNX6Q9UNH7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX6Q9UNH7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.39■□□□□ 0.85
SNX6Q9UNH7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SNX6Q9UNH7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX6Q9UNH7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX6Q9UNH7 BX005040.4-201ENST00000637145 1518 ntBASIC20.37■□□□□ 0.85
SNX6Q9UNH7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX6Q9UNH7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX6Q9UNH7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX6Q9UNH7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX6Q9UNH7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms