Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 AC137630.3-201ENST00000607245 391 ntBASIC20.4■□□□□ 0.86
NDE1Q9NXR1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 GABARAPL3-202ENST00000624044 1851 ntBASIC20.4■□□□□ 0.86
NDE1Q9NXR1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.4■□□□□ 0.86
NDE1Q9NXR1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NDE1Q9NXR1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.39■□□□□ 0.86
NDE1Q9NXR1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NDE1Q9NXR1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.39■□□□□ 0.86
NDE1Q9NXR1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NDE1Q9NXR1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 AL499627.2-201ENST00000606283 725 ntBASIC20.39■□□□□ 0.85
NDE1Q9NXR1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NDE1Q9NXR1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 MIR4508-201ENST00000584178 70 ntBASIC20.38■□□□□ 0.85
NDE1Q9NXR1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 AC009102.2-201ENST00000606772 1639 ntBASIC20.38■□□□□ 0.85
NDE1Q9NXR1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NDE1Q9NXR1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 AL031602.1-201ENST00000633169 911 ntBASIC20.37■□□□□ 0.85
NDE1Q9NXR1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.37■□□□□ 0.85
NDE1Q9NXR1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.36■□□□□ 0.85
NDE1Q9NXR1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms