Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 AC026471.6-201ENST00000622954 1905 ntBASIC24.18■■□□□ 1.46
RNF146Q9NTX7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 KRT18P6-201ENST00000555540 1265 ntBASIC24.18■■□□□ 1.46
RNF146Q9NTX7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 AC016405.3-201ENST00000607710 860 ntBASIC24.18■■□□□ 1.46
RNF146Q9NTX7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF146Q9NTX7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 AC093787.1-201ENST00000450396 207 ntBASIC24.17■■□□□ 1.46
RNF146Q9NTX7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 OR10C1-204ENST00000622521 1039 ntBASIC24.17■■□□□ 1.46
RNF146Q9NTX7 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 AC133041.1-202ENST00000642053 222 ntBASIC24.17■■□□□ 1.46
RNF146Q9NTX7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.17■■□□□ 1.46
RNF146Q9NTX7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 MKRN4P-201ENST00000444706 1521 ntBASIC24.16■■□□□ 1.46
RNF146Q9NTX7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 AC069236.1-201ENST00000604339 616 ntBASIC24.16■■□□□ 1.46
RNF146Q9NTX7 AC008694.1-202ENST00000636953 945 ntBASIC24.16■■□□□ 1.46
RNF146Q9NTX7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.16■■□□□ 1.46
RNF146Q9NTX7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF146Q9NTX7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.46
RNF146Q9NTX7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
RNF146Q9NTX7 MIPEPP3-201ENST00000412105 444 ntBASIC24.14■■□□□ 1.45
RNF146Q9NTX7 AC073210.2-201ENST00000430369 194 ntBASIC24.14■■□□□ 1.45
RNF146Q9NTX7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
RNF146Q9NTX7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.14■■□□□ 1.45
RNF146Q9NTX7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF146Q9NTX7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.14■■□□□ 1.45
RNF146Q9NTX7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
RNF146Q9NTX7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 AC243732.1-201ENST00000612648 864 ntBASIC24.13■■□□□ 1.45
RNF146Q9NTX7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
RNF146Q9NTX7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF146Q9NTX7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF146Q9NTX7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.12■■□□□ 1.45
RNF146Q9NTX7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF146Q9NTX7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms