Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM9Q9NQV7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 KRT19P1-201ENST00000405746 1186 ntBASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 KRT18P61-201ENST00000585825 1298 ntBASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM9Q9NQV7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 EEF1DP3-203ENST00000566025 782 ntBASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 AC053503.5-201ENST00000601508 636 ntBASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM9Q9NQV7 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM9Q9NQV7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 AC104187.1-201ENST00000607510 612 ntBASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PRDM9Q9NQV7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM9Q9NQV7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM9Q9NQV7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms