Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.19■□□□□ 0.98
MRM3Q9HC36 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.19■□□□□ 0.98
MRM3Q9HC36 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MRM3Q9HC36 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.19■□□□□ 0.98
MRM3Q9HC36 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRM3Q9HC36 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MRM3Q9HC36 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MRM3Q9HC36 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.18■□□□□ 0.98
MRM3Q9HC36 AL049796.1-201ENST00000565336 1766 ntBASIC21.18■□□□□ 0.98
MRM3Q9HC36 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MRM3Q9HC36 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MRM3Q9HC36 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.18■□□□□ 0.98
MRM3Q9HC36 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.18■□□□□ 0.98
MRM3Q9HC36 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.18■□□□□ 0.98
MRM3Q9HC36 TPRG1LP1-201ENST00000598702 760 ntBASIC21.18■□□□□ 0.98
MRM3Q9HC36 AL358852.1-201ENST00000623174 1268 ntBASIC21.18■□□□□ 0.98
MRM3Q9HC36 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.18■□□□□ 0.98
MRM3Q9HC36 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.18■□□□□ 0.98
MRM3Q9HC36 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRM3Q9HC36 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.17■□□□□ 0.98
MRM3Q9HC36 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRM3Q9HC36 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRM3Q9HC36 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MRM3Q9HC36 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.17■□□□□ 0.98
MRM3Q9HC36 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.17■□□□□ 0.98
MRM3Q9HC36 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRM3Q9HC36 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MRM3Q9HC36 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRM3Q9HC36 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRM3Q9HC36 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.17■□□□□ 0.98
MRM3Q9HC36 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.16■□□□□ 0.98
MRM3Q9HC36 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MRM3Q9HC36 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.16■□□□□ 0.98
MRM3Q9HC36 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.16■□□□□ 0.98
MRM3Q9HC36 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MRM3Q9HC36 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.16■□□□□ 0.98
MRM3Q9HC36 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MRM3Q9HC36 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MRM3Q9HC36 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
MRM3Q9HC36 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MRM3Q9HC36 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRM3Q9HC36 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.15■□□□□ 0.98
MRM3Q9HC36 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
MRM3Q9HC36 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.15■□□□□ 0.98
MRM3Q9HC36 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MRM3Q9HC36 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRM3Q9HC36 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MRM3Q9HC36 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.15■□□□□ 0.98
MRM3Q9HC36 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MRM3Q9HC36 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.15■□□□□ 0.98
MRM3Q9HC36 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.15■□□□□ 0.98
MRM3Q9HC36 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.15■□□□□ 0.98
MRM3Q9HC36 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRM3Q9HC36 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRM3Q9HC36 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
MRM3Q9HC36 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.14■□□□□ 0.98
MRM3Q9HC36 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
MRM3Q9HC36 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
MRM3Q9HC36 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
MRM3Q9HC36 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRM3Q9HC36 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.14■□□□□ 0.97
MRM3Q9HC36 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRM3Q9HC36 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRM3Q9HC36 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.14■□□□□ 0.97
MRM3Q9HC36 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.14■□□□□ 0.97
MRM3Q9HC36 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.14■□□□□ 0.97
MRM3Q9HC36 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.14■□□□□ 0.97
MRM3Q9HC36 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRM3Q9HC36 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.13■□□□□ 0.97
MRM3Q9HC36 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRM3Q9HC36 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
MRM3Q9HC36 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
MRM3Q9HC36 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.13■□□□□ 0.97
MRM3Q9HC36 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.13■□□□□ 0.97
MRM3Q9HC36 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MRM3Q9HC36 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MRM3Q9HC36 EEF1DP3-203ENST00000566025 782 ntBASIC21.13■□□□□ 0.97
MRM3Q9HC36 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MRM3Q9HC36 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.13■□□□□ 0.97
MRM3Q9HC36 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
MRM3Q9HC36 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRM3Q9HC36 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.13■□□□□ 0.97
MRM3Q9HC36 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MRM3Q9HC36 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRM3Q9HC36 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRM3Q9HC36 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRM3Q9HC36 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRM3Q9HC36 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRM3Q9HC36 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.12■□□□□ 0.97
MRM3Q9HC36 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.12■□□□□ 0.97
MRM3Q9HC36 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.12■□□□□ 0.97
MRM3Q9HC36 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.12■□□□□ 0.97
MRM3Q9HC36 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
MRM3Q9HC36 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms