Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF556Q9HAH1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF556Q9HAH1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.52■□□□□ 0.71
ZNF556Q9HAH1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF556Q9HAH1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF556Q9HAH1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.52■□□□□ 0.71
ZNF556Q9HAH1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
ZNF556Q9HAH1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.52■□□□□ 0.71
ZNF556Q9HAH1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 LINC01006-201ENST00000333319 2292 ntBASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF556Q9HAH1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF556Q9HAH1 AL049796.1-201ENST00000565336 1766 ntBASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 TSPY9P-201ENST00000440215 945 ntBASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 TSPY11P-201ENST00000442607 1045 ntBASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 pRNA.6-201ENST00000610482 90 ntBASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 pRNA.5-201ENST00000612139 90 ntBASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 pRNA.11-201ENST00000618423 90 ntBASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 pRNA.13-201ENST00000619112 90 ntBASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ZNF556Q9HAH1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 AL034346.1-201ENST00000568244 1277 ntBASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF556Q9HAH1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF556Q9HAH1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF556Q9HAH1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF556Q9HAH1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNF556Q9HAH1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ZNF556Q9HAH1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF556Q9HAH1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF556Q9HAH1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ZNF556Q9HAH1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF556Q9HAH1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF556Q9HAH1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF556Q9HAH1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 783.4 ms