Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MAP1LC3AQ9H492 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MAP1LC3AQ9H492 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MAP1LC3AQ9H492 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
MAP1LC3AQ9H492 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MAP1LC3AQ9H492 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MAP1LC3AQ9H492 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
MAP1LC3AQ9H492 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 C17orf82-201ENST00000623772 1530 ntBASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 MIR4281-201ENST00000580852 62 ntBASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 AL049796.1-201ENST00000565336 1766 ntBASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MAP1LC3AQ9H492 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 AC019171.1-201ENST00000601251 1056 ntBASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MAP1LC3AQ9H492 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MAP1LC3AQ9H492 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms