Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 ZNRF2P3-201ENST00000424200 374 ntBASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 AC105265.2-201ENST00000467189 838 ntBASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NUCKS1Q9H1E3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.85■■□□□ 1.25
NUCKS1Q9H1E3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
NUCKS1Q9H1E3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
NUCKS1Q9H1E3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
NUCKS1Q9H1E3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
NUCKS1Q9H1E3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
NUCKS1Q9H1E3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
NUCKS1Q9H1E3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.84■■□□□ 1.25
NUCKS1Q9H1E3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
NUCKS1Q9H1E3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NUCKS1Q9H1E3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
NUCKS1Q9H1E3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.83■■□□□ 1.25
NUCKS1Q9H1E3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
NUCKS1Q9H1E3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
NUCKS1Q9H1E3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
NUCKS1Q9H1E3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NUCKS1Q9H1E3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
NUCKS1Q9H1E3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms