Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NEK1Q96PY6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK1Q96PY6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK1Q96PY6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NEK1Q96PY6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK1Q96PY6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
NEK1Q96PY6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.05■■□□□ 1.6
NEK1Q96PY6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.05■■□□□ 1.6
NEK1Q96PY6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK1Q96PY6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK1Q96PY6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK1Q96PY6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK1Q96PY6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK1Q96PY6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NEK1Q96PY6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.04■■□□□ 1.6
NEK1Q96PY6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK1Q96PY6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NEK1Q96PY6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.04■■□□□ 1.6
NEK1Q96PY6 AF106564.1-201ENST00000607058 2553 ntBASIC25.04■■□□□ 1.6
NEK1Q96PY6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK1Q96PY6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
NEK1Q96PY6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.04■■□□□ 1.6
NEK1Q96PY6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.04■■□□□ 1.6
NEK1Q96PY6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.04■■□□□ 1.6
NEK1Q96PY6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NEK1Q96PY6 AL024507.2-201ENST00000606070 2574 ntBASIC25.03■■□□□ 1.6
NEK1Q96PY6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.03■■□□□ 1.6
NEK1Q96PY6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NEK1Q96PY6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NEK1Q96PY6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NEK1Q96PY6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NEK1Q96PY6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
NEK1Q96PY6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NEK1Q96PY6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NEK1Q96PY6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.03■■□□□ 1.6
NEK1Q96PY6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC25.03■■□□□ 1.6
NEK1Q96PY6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
NEK1Q96PY6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.02■■□□□ 1.6
NEK1Q96PY6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
NEK1Q96PY6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
NEK1Q96PY6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NEK1Q96PY6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.02■■□□□ 1.6
NEK1Q96PY6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.02■■□□□ 1.6
NEK1Q96PY6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NEK1Q96PY6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
NEK1Q96PY6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
NEK1Q96PY6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NEK1Q96PY6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
NEK1Q96PY6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NEK1Q96PY6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.02■■□□□ 1.6
NEK1Q96PY6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
NEK1Q96PY6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NEK1Q96PY6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NEK1Q96PY6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NEK1Q96PY6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NEK1Q96PY6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.01■■□□□ 1.59
NEK1Q96PY6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.01■■□□□ 1.59
NEK1Q96PY6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
NEK1Q96PY6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NEK1Q96PY6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
NEK1Q96PY6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NEK1Q96PY6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NEK1Q96PY6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
NEK1Q96PY6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
NEK1Q96PY6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NEK1Q96PY6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25■■□□□ 1.59
NEK1Q96PY6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25■■□□□ 1.59
NEK1Q96PY6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
NEK1Q96PY6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25■■□□□ 1.59
NEK1Q96PY6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25■■□□□ 1.59
NEK1Q96PY6 EEF1DP3-203ENST00000566025 782 ntBASIC25■■□□□ 1.59
NEK1Q96PY6 SP2-202ENST00000613139 908 ntTSL 5 BASIC25■■□□□ 1.59
NEK1Q96PY6 LINC02228-203ENST00000641970 1355 ntBASIC25■■□□□ 1.59
NEK1Q96PY6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
NEK1Q96PY6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25■■□□□ 1.59
NEK1Q96PY6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25■■□□□ 1.59
NEK1Q96PY6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25■■□□□ 1.59
NEK1Q96PY6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25■■□□□ 1.59
NEK1Q96PY6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
NEK1Q96PY6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
NEK1Q96PY6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NEK1Q96PY6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NEK1Q96PY6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NEK1Q96PY6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.99■■□□□ 1.59
NEK1Q96PY6 AC123595.1-201ENST00000440769 1046 ntBASIC24.99■■□□□ 1.59
NEK1Q96PY6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.99■■□□□ 1.59
NEK1Q96PY6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.99■■□□□ 1.59
NEK1Q96PY6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.99■■□□□ 1.59
NEK1Q96PY6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.99■■□□□ 1.59
NEK1Q96PY6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
NEK1Q96PY6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
NEK1Q96PY6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.98■■□□□ 1.59
NEK1Q96PY6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NEK1Q96PY6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NEK1Q96PY6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.98■■□□□ 1.59
NEK1Q96PY6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NEK1Q96PY6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NEK1Q96PY6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NEK1Q96PY6 AC079140.4-201ENST00000507448 529 ntBASIC24.98■■□□□ 1.59
NEK1Q96PY6 AC053503.5-201ENST00000601508 636 ntBASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms