Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 KRT18P20-201ENST00000548986 1279 ntBASIC17.19■□□□□ 0.34
ZNF48Q96MX3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 AC010536.3-201ENST00000620306 533 ntBASIC17.19■□□□□ 0.34
ZNF48Q96MX3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF48Q96MX3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 AC087742.1-201ENST00000575880 1738 ntBASIC17.18■□□□□ 0.34
ZNF48Q96MX3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 AP006587.3-201ENST00000525742 1516 ntBASIC17.18■□□□□ 0.34
ZNF48Q96MX3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.18■□□□□ 0.34
ZNF48Q96MX3 CD99P1-205ENST00000527459 561 ntBASIC17.18■□□□□ 0.34
ZNF48Q96MX3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 AL034346.1-201ENST00000568244 1277 ntBASIC17.18■□□□□ 0.34
ZNF48Q96MX3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF48Q96MX3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 EEF1DP3-203ENST00000566025 782 ntBASIC17.17■□□□□ 0.34
ZNF48Q96MX3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF48Q96MX3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF48Q96MX3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF48Q96MX3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZNF48Q96MX3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF48Q96MX3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF48Q96MX3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF48Q96MX3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF48Q96MX3 SLC29A4P1-201ENST00000398760 971 ntBASIC17.16■□□□□ 0.34
ZNF48Q96MX3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZNF48Q96MX3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF48Q96MX3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF48Q96MX3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF48Q96MX3 EP400NL-214ENST00000641289 2402 ntBASIC17.16■□□□□ 0.34
ZNF48Q96MX3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 AF201337.1-201ENST00000520239 748 ntBASIC17.15■□□□□ 0.34
ZNF48Q96MX3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 KRT18P6-201ENST00000555540 1265 ntBASIC17.15■□□□□ 0.34
ZNF48Q96MX3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 AC105036.2-201ENST00000569468 176 ntBASIC17.15■□□□□ 0.34
ZNF48Q96MX3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms