Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXRED1Q96CU9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXRED1Q96CU9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 AC006455.2-201ENST00000429931 906 ntBASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 AC092171.4-201ENST00000609130 632 ntBASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 AC092667.1-201ENST00000434301 2586 ntBASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXRED1Q96CU9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 AC099791.2-201ENST00000605725 427 ntBASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
FOXRED1Q96CU9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXRED1Q96CU9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 MIR3181-201ENST00000578512 73 ntBASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 MIR4466-201ENST00000606121 54 ntBASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXRED1Q96CU9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms