Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.6■□□□□ 0.57
AP3S1Q92572 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.6■□□□□ 0.57
AP3S1Q92572 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
AP3S1Q92572 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
AP3S1Q92572 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
AP3S1Q92572 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.6■□□□□ 0.57
AP3S1Q92572 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.6■□□□□ 0.57
AP3S1Q92572 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
AP3S1Q92572 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
AP3S1Q92572 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
AP3S1Q92572 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
AP3S1Q92572 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
AP3S1Q92572 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
AP3S1Q92572 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.59■□□□□ 0.57
AP3S1Q92572 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
AP3S1Q92572 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
AP3S1Q92572 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S1Q92572 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP3S1Q92572 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP3S1Q92572 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
AP3S1Q92572 AC073314.1-201ENST00000568729 2216 ntBASIC18.58■□□□□ 0.57
AP3S1Q92572 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.58■□□□□ 0.57
AP3S1Q92572 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP3S1Q92572 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
AP3S1Q92572 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP3S1Q92572 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
AP3S1Q92572 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP3S1Q92572 AC006128.1-201ENST00000624704 1661 ntBASIC18.58■□□□□ 0.57
AP3S1Q92572 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3S1Q92572 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3S1Q92572 KRT18P24-201ENST00000344739 1156 ntBASIC18.58■□□□□ 0.56
AP3S1Q92572 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.58■□□□□ 0.56
AP3S1Q92572 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3S1Q92572 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3S1Q92572 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3S1Q92572 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3S1Q92572 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3S1Q92572 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3S1Q92572 AFG3L1P-217ENST00000557444 2447 ntBASIC18.58■□□□□ 0.56
AP3S1Q92572 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3S1Q92572 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.57■□□□□ 0.56
AP3S1Q92572 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.57■□□□□ 0.56
AP3S1Q92572 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3S1Q92572 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
AP3S1Q92572 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3S1Q92572 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3S1Q92572 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.56■□□□□ 0.56
AP3S1Q92572 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.56■□□□□ 0.56
AP3S1Q92572 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3S1Q92572 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.56■□□□□ 0.56
AP3S1Q92572 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
AP3S1Q92572 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.56■□□□□ 0.56
AP3S1Q92572 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.56■□□□□ 0.56
AP3S1Q92572 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.56■□□□□ 0.56
AP3S1Q92572 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.56■□□□□ 0.56
AP3S1Q92572 SNX5-217ENST00000606557 1087 ntBASIC18.56■□□□□ 0.56
AP3S1Q92572 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP3S1Q92572 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3S1Q92572 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3S1Q92572 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
AP3S1Q92572 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3S1Q92572 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms