Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40AQ8WXH6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40AQ8WXH6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40AQ8WXH6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40AQ8WXH6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40AQ8WXH6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40AQ8WXH6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40AQ8WXH6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 MIR3181-201ENST00000578512 73 ntBASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40AQ8WXH6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40AQ8WXH6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 pRNA.6-201ENST00000610482 90 ntBASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 pRNA.5-201ENST00000612139 90 ntBASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 pRNA.11-201ENST00000618423 90 ntBASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 pRNA.13-201ENST00000619112 90 ntBASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 AC136469.2-201ENST00000623944 1028 ntBASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 AL136967.2-201ENST00000623968 743 ntBASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40AQ8WXH6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 LINC01006-201ENST00000333319 2292 ntBASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 AF213884.3-201ENST00000563833 479 ntBASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40AQ8WXH6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 MIR939-201ENST00000401314 82 ntBASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 AP001330.3-201ENST00000520123 633 ntBASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40AQ8WXH6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms