Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 SYT6-210ENST00000641643 1587 ntBASIC21.19■□□□□ 0.98
SLC44A1Q8WWI5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.18■□□□□ 0.98
SLC44A1Q8WWI5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 DUX4L19-201ENST00000557448 1267 ntBASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 AC011298.3-201ENST00000615796 283 ntBASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC44A1Q8WWI5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC44A1Q8WWI5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 AC006128.1-201ENST00000624704 1661 ntBASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SLC44A1Q8WWI5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
SLC44A1Q8WWI5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
SLC44A1Q8WWI5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SLC44A1Q8WWI5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SLC44A1Q8WWI5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC44A1Q8WWI5 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.14■□□□□ 0.97
SLC44A1Q8WWI5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC44A1Q8WWI5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.14■□□□□ 0.97
SLC44A1Q8WWI5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC44A1Q8WWI5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC44A1Q8WWI5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SLC44A1Q8WWI5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC44A1Q8WWI5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 AC092667.1-201ENST00000434301 2586 ntBASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms