Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
BBS1Q8NFJ9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BBS1Q8NFJ9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19■□□□□ 0.63
BBS1Q8NFJ9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BBS1Q8NFJ9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
BBS1Q8NFJ9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 GUSBP5-201ENST00000418136 578 ntBASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 AL034346.1-201ENST00000568244 1277 ntBASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.98■□□□□ 0.63
BBS1Q8NFJ9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 AC092667.1-201ENST00000434301 2586 ntBASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BBS1Q8NFJ9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 SERBP1P1-201ENST00000396021 1160 ntBASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 AC092171.4-201ENST00000609130 632 ntBASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.96■□□□□ 0.63
BBS1Q8NFJ9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
BBS1Q8NFJ9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BBS1Q8NFJ9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BBS1Q8NFJ9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BBS1Q8NFJ9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BBS1Q8NFJ9 SLC47A1P1-202ENST00000449666 945 ntBASIC18.94■□□□□ 0.62
BBS1Q8NFJ9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BBS1Q8NFJ9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.94■□□□□ 0.62
BBS1Q8NFJ9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
BBS1Q8NFJ9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BBS1Q8NFJ9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BBS1Q8NFJ9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
BBS1Q8NFJ9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BBS1Q8NFJ9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms