Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 AL033527.3-201ENST00000566366 1196 ntBASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC71LQ8N9Z2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 AL451085.2-201ENST00000605085 799 ntBASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 AC010997.5-201ENST00000609182 354 ntBASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 AL117332.1-201ENST00000622628 974 ntBASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71LQ8N9Z2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC71LQ8N9Z2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC71LQ8N9Z2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC71LQ8N9Z2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC71LQ8N9Z2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC71LQ8N9Z2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC71LQ8N9Z2 Z92544.1-202ENST00000571933 1220 ntBASIC17.52■□□□□ 0.4
CCDC71LQ8N9Z2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC71LQ8N9Z2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC71LQ8N9Z2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC71LQ8N9Z2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CCDC71LQ8N9Z2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC71LQ8N9Z2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC71LQ8N9Z2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC71LQ8N9Z2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC71LQ8N9Z2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms