Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCUBE3Q8IX30 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.28■■□□□ 1.16
SCUBE3Q8IX30 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SCUBE3Q8IX30 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCUBE3Q8IX30 KRT18P61-201ENST00000585825 1298 ntBASIC22.28■■□□□ 1.16
SCUBE3Q8IX30 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.28■■□□□ 1.16
SCUBE3Q8IX30 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCUBE3Q8IX30 AC244015.2-201ENST00000616358 1861 ntBASIC22.28■■□□□ 1.16
SCUBE3Q8IX30 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCUBE3Q8IX30 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 EEF1DP3-203ENST00000566025 782 ntBASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SCUBE3Q8IX30 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.27■■□□□ 1.15
SCUBE3Q8IX30 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
SCUBE3Q8IX30 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.27■■□□□ 1.15
SCUBE3Q8IX30 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 AC053503.5-201ENST00000601508 636 ntBASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.26■■□□□ 1.15
SCUBE3Q8IX30 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 KRT18P5-201ENST00000436075 1291 ntBASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 AC104187.1-201ENST00000607510 612 ntBASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCUBE3Q8IX30 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SCUBE3Q8IX30 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SCUBE3Q8IX30 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SCUBE3Q8IX30 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.24■■□□□ 1.15
SCUBE3Q8IX30 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.24■■□□□ 1.15
SCUBE3Q8IX30 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.24■■□□□ 1.15
SCUBE3Q8IX30 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.24■■□□□ 1.15
SCUBE3Q8IX30 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SCUBE3Q8IX30 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SCUBE3Q8IX30 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SCUBE3Q8IX30 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE3Q8IX30 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SCUBE3Q8IX30 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE3Q8IX30 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE3Q8IX30 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SCUBE3Q8IX30 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE3Q8IX30 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.22■■□□□ 1.15
SCUBE3Q8IX30 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.22■■□□□ 1.15
SCUBE3Q8IX30 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE3Q8IX30 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE3Q8IX30 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms