Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.57■□□□□ 0.56
LYSMD2Q8IV50 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD2Q8IV50 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD2Q8IV50 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 AC129492.7-201ENST00000622992 756 ntBASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.54■□□□□ 0.56
LYSMD2Q8IV50 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 AC120024.1-201ENST00000562672 995 ntBASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.53■□□□□ 0.56
LYSMD2Q8IV50 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD2Q8IV50 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms