Protein–RNA interactions for Protein: Q86VQ0

LCA5, Lebercilin, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5Q86VQ0 AL049796.1-201ENST00000565336 1766 ntBASIC21.01■□□□□ 0.95
LCA5Q86VQ0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LCA5Q86VQ0 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.01■□□□□ 0.95
LCA5Q86VQ0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCA5Q86VQ0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.01■□□□□ 0.95
LCA5Q86VQ0 SYT6-210ENST00000641643 1587 ntBASIC21.01■□□□□ 0.95
LCA5Q86VQ0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.01■□□□□ 0.95
LCA5Q86VQ0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCA5Q86VQ0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21■□□□□ 0.95
LCA5Q86VQ0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCA5Q86VQ0 AL391422.3-201ENST00000603791 2761 ntBASIC21■□□□□ 0.95
LCA5Q86VQ0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCA5Q86VQ0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
LCA5Q86VQ0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LCA5Q86VQ0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21■□□□□ 0.95
LCA5Q86VQ0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCA5Q86VQ0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LCA5Q86VQ0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCA5Q86VQ0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LCA5Q86VQ0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21■□□□□ 0.95
LCA5Q86VQ0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
LCA5Q86VQ0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 SERBP1P1-201ENST00000396021 1160 ntBASIC20.98■□□□□ 0.95
LCA5Q86VQ0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCA5Q86VQ0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCA5Q86VQ0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LCA5Q86VQ0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.97■□□□□ 0.95
LCA5Q86VQ0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LCA5Q86VQ0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LCA5Q86VQ0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCA5Q86VQ0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCA5Q86VQ0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LCA5Q86VQ0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCA5Q86VQ0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LCA5Q86VQ0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 LINC01521-201ENST00000504184 1943 ntBASIC20.96■□□□□ 0.95
LCA5Q86VQ0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.96■□□□□ 0.95
LCA5Q86VQ0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCA5Q86VQ0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LCA5Q86VQ0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LCA5Q86VQ0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.95■□□□□ 0.94
LCA5Q86VQ0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCA5Q86VQ0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCA5Q86VQ0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.95■□□□□ 0.94
LCA5Q86VQ0 AP006587.3-201ENST00000525742 1516 ntBASIC20.95■□□□□ 0.94
LCA5Q86VQ0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.95■□□□□ 0.94
LCA5Q86VQ0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCA5Q86VQ0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.95■□□□□ 0.94
LCA5Q86VQ0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
LCA5Q86VQ0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms