Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 KRT18P61-201ENST00000585825 1298 ntBASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 AC004854.2-201ENST00000608450 1441 ntBASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.25■□□□□ 0.99
LYSMD3Q7Z3D4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 AP004607.4-201ENST00000530158 1459 ntBASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LYSMD3Q7Z3D4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.23■□□□□ 0.99
LYSMD3Q7Z3D4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 KRT18P5-201ENST00000436075 1291 ntBASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 EEF1DP3-203ENST00000566025 782 ntBASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 NTF6G-201ENST00000591094 616 ntBASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 SLC25A24-204ENST00000569674 2357 ntBASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD3Q7Z3D4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.21■□□□□ 0.99
LYSMD3Q7Z3D4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
LYSMD3Q7Z3D4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.2■□□□□ 0.99
LYSMD3Q7Z3D4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD3Q7Z3D4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms