Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.51■□□□□ 0.233e-6■■■■□ 19.3
LARP4Q71RC2 RNASEH2C-207ENST00000534482 913 ntTSL 316.04■□□□□ 0.163e-6■■■■□ 19.3
LARP4Q71RC2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.143e-6■■■■□ 19.3
LARP4Q71RC2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.61■■□□□ 1.691e-7■■■■□ 19.3
LARP4Q71RC2 GUSB-205ENST00000447929 1983 ntTSL 324.84■■□□□ 1.571e-7■■■■□ 19.3
LARP4Q71RC2 GUSB-203ENST00000430730 1859 ntTSL 523.94■■□□□ 1.421e-7■■■■□ 19.3
LARP4Q71RC2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.051e-7■■■■□ 19.3
LARP4Q71RC2 GUSB-209ENST00000466883 2555 ntTSL 215.84■□□□□ 0.131e-7■■■■□ 19.3
LARP4Q71RC2 PIGT-253ENST00000640108 2109 ntTSL 515.86■□□□□ 0.138e-7■■■■□ 19.3
LARP4Q71RC2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.056e-8■■■■□ 19.3
LARP4Q71RC2 SNRPD3-204ENST00000439775 640 ntTSL 314.81□□□□□ -0.046e-8■■■■□ 19.3
LARP4Q71RC2 SNRPD3-203ENST00000404603 715 ntTSL 57.88□□□□□ -1.156e-8■■■■□ 19.3
LARP4Q71RC2 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.95□□□□□ -1.36e-8■■■■□ 19.3
LARP4Q71RC2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.74■□□□□ 0.593e-16■■■■□ 19.3
LARP4Q71RC2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.323e-16■■■■□ 19.3
LARP4Q71RC2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.73■□□□□ 0.273e-16■■■■□ 19.3
LARP4Q71RC2 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC12.34□□□□□ -0.433e-16■■■■□ 19.3
LARP4Q71RC2 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.242e-7■■■■□ 19.3
LARP4Q71RC2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.252e-6■■■■□ 19.3
LARP4Q71RC2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.22e-6■■■■□ 19.3
LARP4Q71RC2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.132e-6■■■■□ 19.3
LARP4Q71RC2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.13□□□□□ -1.752e-6■■■■□ 19.3
LARP4Q71RC2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.68e-7■■■■□ 19.3
LARP4Q71RC2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.358e-7■■■■□ 19.3
LARP4Q71RC2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.348e-7■■■■□ 19.3
LARP4Q71RC2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.178e-7■■■■□ 19.3
LARP4Q71RC2 RHOC-212ENST00000468093 1042 ntTSL 314.16□□□□□ -0.148e-7■■■■□ 19.3
LARP4Q71RC2 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.418e-7■■■■□ 19.3
LARP4Q71RC2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.1□□□□□ -0.154e-6■■■■□ 19.3
LARP4Q71RC2 EGFR-211ENST00000638463 4735 ntTSL 5 BASIC10.56□□□□□ -0.724e-6■■■■□ 19.3
LARP4Q71RC2 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.724e-6■■■■□ 19.3
LARP4Q71RC2 NUCB1-212ENST00000492367 1515 ntTSL 218.39■□□□□ 0.538e-7■■■■□ 19.3
LARP4Q71RC2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.443e-7■■■■□ 19.3
LARP4Q71RC2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.11□□□□□ -1.753e-7■■■■□ 19.3
LARP4Q71RC2 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.76□□□□□ -0.371e-6■■■□□ 19.2
LARP4Q71RC2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.648e-7■■■□□ 19.2
LARP4Q71RC2 DNTTIP1-205ENST00000456939 1073 ntTSL 518.48■□□□□ 0.558e-7■■■□□ 19.2
LARP4Q71RC2 DNTTIP1-203ENST00000435014 930 ntTSL 59.36□□□□□ -0.918e-7■■■□□ 19.2
LARP4Q71RC2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.022e-6■■■□□ 19.2
LARP4Q71RC2 CCT3-206ENST00000368262 2048 ntTSL 214.15□□□□□ -0.142e-6■■■□□ 19.2
LARP4Q71RC2 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.16□□□□□ -0.32e-6■■■□□ 19.2
LARP4Q71RC2 CCT3-203ENST00000368258 1885 ntTSL 212.34□□□□□ -0.432e-6■■■□□ 19.2
LARP4Q71RC2 CCT3-205ENST00000368261 863 ntTSL 510.57□□□□□ -0.722e-6■■■□□ 19.2
LARP4Q71RC2 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.931e-32■■■□□ 19.2
LARP4Q71RC2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.291e-9■■■□□ 19.2
LARP4Q71RC2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.69■□□□□ 0.261e-9■■■□□ 19.2
LARP4Q71RC2 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.21e-9■■■□□ 19.2
LARP4Q71RC2 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC13.48□□□□□ -0.251e-9■■■□□ 19.2
LARP4Q71RC2 MOV10-216ENST00000495374 705 ntTSL 213.31□□□□□ -0.281e-9■■■□□ 19.2
LARP4Q71RC2 MOV10-214ENST00000490413 1370 ntTSL 213.3□□□□□ -0.281e-9■■■□□ 19.2
LARP4Q71RC2 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC13.11□□□□□ -0.311e-9■■■□□ 19.2
LARP4Q71RC2 GLOD4-212ENST00000575800 276 ntTSL 312.37□□□□□ -0.431e-9■■■□□ 19.2
LARP4Q71RC2 MOV10-204ENST00000413052 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.471e-9■■■□□ 19.2
LARP4Q71RC2 MOV10-203ENST00000369645 3552 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.541e-9■■■□□ 19.2
LARP4Q71RC2 GLOD4-201ENST00000301328 1809 ntTSL 1 (best) BASIC11.13□□□□□ -0.631e-9■■■□□ 19.2
LARP4Q71RC2 ESYT1-201ENST00000267113 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.641e-9■■■□□ 19.2
LARP4Q71RC2 MOV10-201ENST00000357443 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.791e-9■■■□□ 19.2
LARP4Q71RC2 MOV10-215ENST00000494319 720 ntTSL 210.08□□□□□ -0.81e-9■■■□□ 19.2
LARP4Q71RC2 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC9.31□□□□□ -0.921e-9■■■□□ 19.2
LARP4Q71RC2 GLOD4-204ENST00000571073 2311 ntTSL 28.91□□□□□ -0.981e-9■■■□□ 19.2
LARP4Q71RC2 MOV10-217ENST00000496577 4312 ntTSL 28.63□□□□□ -1.031e-9■■■□□ 19.2
LARP4Q71RC2 MOV10-206ENST00000468624 4689 ntTSL 58.56□□□□□ -1.041e-9■■■□□ 19.2
LARP4Q71RC2 NACA-213ENST00000549855 711 ntTSL 58.53□□□□□ -1.047e-14■■■□□ 19.2
LARP4Q71RC2 GLOD4-214ENST00000576239 2737 ntTSL 28.16□□□□□ -1.11e-9■■■□□ 19.2
LARP4Q71RC2 PPP1R8-205ENST00000486634 459 ntTSL 35.86□□□□□ -1.471e-9■■■□□ 19.2
LARP4Q71RC2 ZFAS1-207ENST00000458653 596 ntTSL 225.95■■□□□ 1.744e-8■■■□□ 19.2
LARP4Q71RC2 PLEKHH3-202ENST00000456950 2406 ntTSL 223.84■■□□□ 1.411e-6■■■□□ 19.2
LARP4Q71RC2 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)22.95■■□□□ 1.264e-8■■■□□ 19.2
LARP4Q71RC2 ARF1-209ENST00000478424 1059 ntTSL 222.63■■□□□ 1.217e-21■■■□□ 19.2
LARP4Q71RC2 PLEKHH3-205ENST00000591196 2640 ntTSL 1 (best)22.31■■□□□ 1.161e-6■■■□□ 19.2
LARP4Q71RC2 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)21.79■■□□□ 1.084e-8■■■□□ 19.2
LARP4Q71RC2 PLEKHH3-203ENST00000587627 1047 ntTSL 521.03■□□□□ 0.961e-6■■■□□ 19.2
LARP4Q71RC2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.02■□□□□ 0.951e-6■■■□□ 19.2
LARP4Q71RC2 QTRT1-207ENST00000589488 1571 ntTSL 520.91■□□□□ 0.941e-6■■■□□ 19.2
LARP4Q71RC2 DHRSX-207ENST00000478825 679 ntTSL 220.71■□□□□ 0.911e-6■■■□□ 19.2
LARP4Q71RC2 CASC3-207ENST00000581849 580 ntTSL 220.34■□□□□ 0.851e-6■■■□□ 19.2
LARP4Q71RC2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.831e-6■■■□□ 19.2
LARP4Q71RC2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.22■□□□□ 0.831e-6■■■□□ 19.2
LARP4Q71RC2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.19■□□□□ 0.821e-6■■■□□ 19.2
LARP4Q71RC2 CASC3-203ENST00000418132 1986 ntTSL 1 (best)20.17■□□□□ 0.821e-6■■■□□ 19.2
LARP4Q71RC2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.99■□□□□ 0.794e-8■■■□□ 19.2
LARP4Q71RC2 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)19.99■□□□□ 0.794e-8■■■□□ 19.2
LARP4Q71RC2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.721e-6■■■□□ 19.2
LARP4Q71RC2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.671e-6■■■□□ 19.2
LARP4Q71RC2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.671e-6■■■□□ 19.2
LARP4Q71RC2 DHRSX-203ENST00000430536 490 ntTSL 219.1■□□□□ 0.651e-6■■■□□ 19.2
LARP4Q71RC2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.631e-6■■■□□ 19.2
LARP4Q71RC2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.631e-6■■■□□ 19.2
LARP4Q71RC2 ARF1-206ENST00000473949 578 ntTSL 518.84■□□□□ 0.611e-6■■■□□ 19.2
LARP4Q71RC2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.561e-6■■■□□ 19.2
LARP4Q71RC2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.561e-6■■■□□ 19.2
LARP4Q71RC2 DHRSX-202ENST00000412516 744 ntTSL 218.49■□□□□ 0.551e-6■■■□□ 19.2
LARP4Q71RC2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.27■□□□□ 0.521e-6■■■□□ 19.2
LARP4Q71RC2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.15■□□□□ 0.51e-6■■■□□ 19.2
LARP4Q71RC2 UBE2I-215ENST00000567074 884 ntTSL 1 (best)17.89■□□□□ 0.451e-6■■■□□ 19.2
LARP4Q71RC2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.431e-6■■■□□ 19.2
LARP4Q71RC2 DHRS3-201ENST00000430996 826 ntTSL 317.44■□□□□ 0.389e-7■■■□□ 19.2
LARP4Q71RC2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.03■□□□□ 0.321e-6■■■□□ 19.2
LARP4Q71RC2 QTRT1-202ENST00000421333 1502 ntTSL 216.97■□□□□ 0.311e-6■■■□□ 19.2
LARP4Q71RC2 PPP4R3A-202ENST00000554390 2953 ntTSL 1 (best)16.85■□□□□ 0.291e-6■■■□□ 19.2
Retrieved 100 of 15,922 protein–RNA pairs in 186.7 ms