Protein–RNA interactions for Protein: Q5MAI5

CDKL4, Cyclin-dependent kinase-like 4, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL4Q5MAI5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 AL137060.1-201ENST00000618151 2648 ntBASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 IRS3P-201ENST00000223076 1006 ntBASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL4Q5MAI5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.53■□□□□ 0.88
CDKL4Q5MAI5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL4Q5MAI5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL4Q5MAI5 MIR638-201ENST00000385237 100 ntBASIC20.53■□□□□ 0.88
CDKL4Q5MAI5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.53■□□□□ 0.88
CDKL4Q5MAI5 AC053503.5-201ENST00000601508 636 ntBASIC20.53■□□□□ 0.88
CDKL4Q5MAI5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL4Q5MAI5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL4Q5MAI5 AL024507.2-201ENST00000606070 2574 ntBASIC20.53■□□□□ 0.88
CDKL4Q5MAI5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 EEF1DP3-203ENST00000566025 782 ntBASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDKL4Q5MAI5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.52■□□□□ 0.87
CDKL4Q5MAI5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.52■□□□□ 0.87
CDKL4Q5MAI5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.52■□□□□ 0.87
CDKL4Q5MAI5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 AL049796.1-201ENST00000565336 1766 ntBASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 AC005229.4-201ENST00000610085 2198 ntBASIC20.51■□□□□ 0.87
CDKL4Q5MAI5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 AC027612.3-201ENST00000413684 1047 ntBASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL4Q5MAI5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 AC105265.2-201ENST00000467189 838 ntBASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL4Q5MAI5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CDKL4Q5MAI5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL4Q5MAI5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL4Q5MAI5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL4Q5MAI5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL4Q5MAI5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL4Q5MAI5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL4Q5MAI5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CDKL4Q5MAI5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms