Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.77■□□□□ 0.92
CACNA1EQ15878 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.77■□□□□ 0.92
CACNA1EQ15878 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.77■□□□□ 0.92
CACNA1EQ15878 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.77■□□□□ 0.92
CACNA1EQ15878 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA1EQ15878 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA1EQ15878 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA1EQ15878 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.76■□□□□ 0.91
CACNA1EQ15878 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CACNA1EQ15878 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA1EQ15878 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CACNA1EQ15878 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.76■□□□□ 0.91
CACNA1EQ15878 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA1EQ15878 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.76■□□□□ 0.91
CACNA1EQ15878 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CACNA1EQ15878 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA1EQ15878 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNA1EQ15878 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CACNA1EQ15878 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.76■□□□□ 0.91
CACNA1EQ15878 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CACNA1EQ15878 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNA1EQ15878 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNA1EQ15878 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CACNA1EQ15878 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNA1EQ15878 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CACNA1EQ15878 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.75■□□□□ 0.91
CACNA1EQ15878 UNC93B4-201ENST00000505679 747 ntBASIC20.75■□□□□ 0.91
CACNA1EQ15878 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CACNA1EQ15878 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CACNA1EQ15878 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.74■□□□□ 0.91
CACNA1EQ15878 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA1EQ15878 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA1EQ15878 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA1EQ15878 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.74■□□□□ 0.91
CACNA1EQ15878 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA1EQ15878 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA1EQ15878 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA1EQ15878 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.73■□□□□ 0.91
CACNA1EQ15878 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.73■□□□□ 0.91
CACNA1EQ15878 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNA1EQ15878 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.73■□□□□ 0.91
CACNA1EQ15878 AL591742.1-201ENST00000604433 565 ntBASIC20.73■□□□□ 0.91
CACNA1EQ15878 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.73■□□□□ 0.91
CACNA1EQ15878 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CACNA1EQ15878 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.73■□□□□ 0.91
CACNA1EQ15878 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNA1EQ15878 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1EQ15878 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CACNA1EQ15878 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNA1EQ15878 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1EQ15878 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CACNA1EQ15878 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1EQ15878 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.72■□□□□ 0.91
CACNA1EQ15878 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CACNA1EQ15878 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
CACNA1EQ15878 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.72■□□□□ 0.91
CACNA1EQ15878 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1EQ15878 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.72■□□□□ 0.91
CACNA1EQ15878 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1EQ15878 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1EQ15878 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.72■□□□□ 0.91
CACNA1EQ15878 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.72■□□□□ 0.91
CACNA1EQ15878 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.72■□□□□ 0.91
CACNA1EQ15878 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1EQ15878 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1EQ15878 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1EQ15878 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1EQ15878 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1EQ15878 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1EQ15878 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1EQ15878 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.71■□□□□ 0.91
CACNA1EQ15878 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.71■□□□□ 0.91
CACNA1EQ15878 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1EQ15878 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CACNA1EQ15878 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CACNA1EQ15878 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1EQ15878 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CACNA1EQ15878 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA1EQ15878 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CACNA1EQ15878 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA1EQ15878 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1EQ15878 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CACNA1EQ15878 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1EQ15878 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1EQ15878 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1EQ15878 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.7■□□□□ 0.9
CACNA1EQ15878 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1EQ15878 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.7■□□□□ 0.9
CACNA1EQ15878 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms