Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 EEF1DP3-203ENST00000566025 782 ntBASIC20.97■□□□□ 0.95
SF3A2Q15428 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.97■□□□□ 0.95
SF3A2Q15428 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SF3A2Q15428 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SF3A2Q15428 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SF3A2Q15428 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.96■□□□□ 0.95
SF3A2Q15428 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.96■□□□□ 0.95
SF3A2Q15428 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SF3A2Q15428 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.96■□□□□ 0.95
SF3A2Q15428 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.96■□□□□ 0.95
SF3A2Q15428 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.96■□□□□ 0.95
SF3A2Q15428 AL359736.2-201ENST00000621992 437 ntBASIC20.96■□□□□ 0.95
SF3A2Q15428 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.96■□□□□ 0.95
SF3A2Q15428 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SF3A2Q15428 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
SF3A2Q15428 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SF3A2Q15428 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SF3A2Q15428 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SF3A2Q15428 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SF3A2Q15428 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.95■□□□□ 0.94
SF3A2Q15428 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.95■□□□□ 0.94
SF3A2Q15428 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.95■□□□□ 0.94
SF3A2Q15428 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.95■□□□□ 0.94
SF3A2Q15428 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SF3A2Q15428 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SF3A2Q15428 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SF3A2Q15428 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.95■□□□□ 0.94
SF3A2Q15428 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SF3A2Q15428 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SF3A2Q15428 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SF3A2Q15428 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SF3A2Q15428 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SF3A2Q15428 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SF3A2Q15428 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SF3A2Q15428 FAM210CP-201ENST00000445714 574 ntBASIC20.94■□□□□ 0.94
SF3A2Q15428 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.94■□□□□ 0.94
SF3A2Q15428 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SF3A2Q15428 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.94■□□□□ 0.94
SF3A2Q15428 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.94■□□□□ 0.94
SF3A2Q15428 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SF3A2Q15428 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.94■□□□□ 0.94
SF3A2Q15428 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.94■□□□□ 0.94
SF3A2Q15428 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.94■□□□□ 0.94
SF3A2Q15428 AC073912.3-201ENST00000624414 853 ntBASIC20.94■□□□□ 0.94
SF3A2Q15428 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SF3A2Q15428 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.94■□□□□ 0.94
SF3A2Q15428 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.94■□□□□ 0.94
SF3A2Q15428 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SF3A2Q15428 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SF3A2Q15428 CLDN5-201ENST00000403084 2357 ntBASIC20.94■□□□□ 0.94
SF3A2Q15428 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SF3A2Q15428 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SF3A2Q15428 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
SF3A2Q15428 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SF3A2Q15428 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SF3A2Q15428 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SF3A2Q15428 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.93■□□□□ 0.94
SF3A2Q15428 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SF3A2Q15428 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SF3A2Q15428 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.93■□□□□ 0.94
SF3A2Q15428 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.93■□□□□ 0.94
SF3A2Q15428 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.93■□□□□ 0.94
SF3A2Q15428 AC053503.5-201ENST00000601508 636 ntBASIC20.93■□□□□ 0.94
SF3A2Q15428 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SF3A2Q15428 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SF3A2Q15428 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SF3A2Q15428 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SF3A2Q15428 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.92■□□□□ 0.94
SF3A2Q15428 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SF3A2Q15428 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SF3A2Q15428 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SF3A2Q15428 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SF3A2Q15428 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SF3A2Q15428 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SF3A2Q15428 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SF3A2Q15428 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.92■□□□□ 0.94
SF3A2Q15428 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.92■□□□□ 0.94
SF3A2Q15428 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.92■□□□□ 0.94
SF3A2Q15428 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.92■□□□□ 0.94
SF3A2Q15428 AC079089.2-201ENST00000531211 1277 ntBASIC20.92■□□□□ 0.94
SF3A2Q15428 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SF3A2Q15428 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SF3A2Q15428 AC010331.1-201ENST00000611423 582 ntBASIC20.92■□□□□ 0.94
SF3A2Q15428 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SF3A2Q15428 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SF3A2Q15428 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.92■□□□□ 0.94
SF3A2Q15428 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms