Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD47Q08722 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD47Q08722 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.57■□□□□ 0.72
CD47Q08722 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CD47Q08722 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD47Q08722 SRD5A1P1-201ENST00000442297 786 ntBASIC19.57■□□□□ 0.72
CD47Q08722 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.57■□□□□ 0.72
CD47Q08722 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.57■□□□□ 0.72
CD47Q08722 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.57■□□□□ 0.72
CD47Q08722 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.57■□□□□ 0.72
CD47Q08722 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.57■□□□□ 0.72
CD47Q08722 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CD47Q08722 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CD47Q08722 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD47Q08722 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.56■□□□□ 0.72
CD47Q08722 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.56■□□□□ 0.72
CD47Q08722 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD47Q08722 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CD47Q08722 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD47Q08722 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CD47Q08722 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD47Q08722 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CD47Q08722 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD47Q08722 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD47Q08722 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.56■□□□□ 0.72
CD47Q08722 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD47Q08722 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CD47Q08722 AC099791.2-201ENST00000605725 427 ntBASIC19.56■□□□□ 0.72
CD47Q08722 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.56■□□□□ 0.72
CD47Q08722 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CD47Q08722 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD47Q08722 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD47Q08722 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CD47Q08722 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD47Q08722 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD47Q08722 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD47Q08722 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD47Q08722 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.55■□□□□ 0.72
CD47Q08722 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CD47Q08722 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD47Q08722 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.55■□□□□ 0.72
CD47Q08722 AC006455.2-201ENST00000429931 906 ntBASIC19.55■□□□□ 0.72
CD47Q08722 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.55■□□□□ 0.72
CD47Q08722 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CD47Q08722 AC104564.3-201ENST00000582367 638 ntBASIC19.55■□□□□ 0.72
CD47Q08722 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.55■□□□□ 0.72
CD47Q08722 AL499627.2-201ENST00000606283 725 ntBASIC19.55■□□□□ 0.72
CD47Q08722 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.55■□□□□ 0.72
CD47Q08722 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.55■□□□□ 0.72
CD47Q08722 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CD47Q08722 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CD47Q08722 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD47Q08722 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.55■□□□□ 0.72
CD47Q08722 OXCT2P1-201ENST00000447263 1535 ntBASIC19.55■□□□□ 0.72
CD47Q08722 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD47Q08722 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD47Q08722 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.54■□□□□ 0.72
CD47Q08722 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CD47Q08722 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CD47Q08722 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.54■□□□□ 0.72
CD47Q08722 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.54■□□□□ 0.72
CD47Q08722 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.54■□□□□ 0.72
CD47Q08722 pRNA.6-201ENST00000610482 90 ntBASIC19.54■□□□□ 0.72
CD47Q08722 pRNA.5-201ENST00000612139 90 ntBASIC19.54■□□□□ 0.72
CD47Q08722 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 pRNA.11-201ENST00000618423 90 ntBASIC19.54■□□□□ 0.72
CD47Q08722 pRNA.13-201ENST00000619112 90 ntBASIC19.54■□□□□ 0.72
CD47Q08722 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.54■□□□□ 0.72
CD47Q08722 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD47Q08722 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CD47Q08722 AL391422.3-201ENST00000603791 2761 ntBASIC19.54■□□□□ 0.72
CD47Q08722 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CD47Q08722 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD47Q08722 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.53■□□□□ 0.72
CD47Q08722 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CD47Q08722 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
CD47Q08722 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD47Q08722 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.53■□□□□ 0.72
CD47Q08722 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.53■□□□□ 0.72
CD47Q08722 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
CD47Q08722 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD47Q08722 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD47Q08722 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.53■□□□□ 0.72
CD47Q08722 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.53■□□□□ 0.72
CD47Q08722 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.53■□□□□ 0.72
CD47Q08722 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD47Q08722 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CD47Q08722 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD47Q08722 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD47Q08722 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms