Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 AL138724.1-201ENST00000606771 1088 ntBASIC16.1■□□□□ 0.17
HIST1H1AQ02539 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HIST1H1AQ02539 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 AC010141.3-201ENST00000456659 717 ntBASIC16.09■□□□□ 0.17
HIST1H1AQ02539 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H1AQ02539 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
HIST1H1AQ02539 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.08■□□□□ 0.17
HIST1H1AQ02539 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H1AQ02539 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H1AQ02539 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H1AQ02539 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1AQ02539 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 AL136116.3-201ENST00000402907 1138 ntBASIC16.07■□□□□ 0.16
HIST1H1AQ02539 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 AC136469.2-201ENST00000623944 1028 ntBASIC16.07■□□□□ 0.16
HIST1H1AQ02539 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1AQ02539 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 AC011298.3-201ENST00000615796 283 ntBASIC16.06■□□□□ 0.16
HIST1H1AQ02539 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1AQ02539 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms