Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 tL(UAG)L1tL(UAG)L1 82 nt2.48□□□□□ -2.01
SMD1Q02260 tL(UAG)L2tL(UAG)L2 82 nt2.48□□□□□ -2.01
SMD1Q02260 BRR6YGL247W 594 nt2.48□□□□□ -2.01
SMD1Q02260 FUR1YHR128W 651 nt2.48□□□□□ -2.01
SMD1Q02260 IKI1YHR187W 930 nt2.48□□□□□ -2.01
SMD1Q02260 COX19YLL018C-A 297 nt2.48□□□□□ -2.01
SMD1Q02260 HMX1YLR205C 954 nt2.48□□□□□ -2.01
SMD1Q02260 YLR400WYLR400W 474 nt2.48□□□□□ -2.01
SMD1Q02260 UNG1YML021C 1080 nt2.48□□□□□ -2.01
SMD1Q02260 PEX11YOL147C 711 nt2.48□□□□□ -2.01
SMD1Q02260 SPR2YOR214C 711 nt2.48□□□□□ -2.01
SMD1Q02260 GRX5YPL059W 453 nt2.48□□□□□ -2.01
SMD1Q02260 YBR053CYBR053C 1077 nt2.48□□□□□ -2.01
SMD1Q02260 POL30YBR088C 777 nt2.48□□□□□ -2.01
SMD1Q02260 RCY1YJL204C 2523 nt2.48□□□□□ -2.01
SMD1Q02260 RRM3YHR031C 2172 nt2.47□□□□□ -2.01
SMD1Q02260 TOM1YDR457W 9807 nt2.47□□□□□ -2.01
SMD1Q02260 BEM4YPL161C 1902 nt2.47□□□□□ -2.01
SMD1Q02260 MFA1YDR461W 111 nt2.47□□□□□ -2.01
SMD1Q02260 SMT3YDR510W 306 nt2.47□□□□□ -2.01
SMD1Q02260 SPT2YER161C 1002 nt2.47□□□□□ -2.01
SMD1Q02260 SEC4YFL005W 648 nt2.47□□□□□ -2.01
SMD1Q02260 OTU1YFL044C 906 nt2.47□□□□□ -2.01
SMD1Q02260 COG7YGL005C 840 nt2.47□□□□□ -2.01
SMD1Q02260 YGL214WYGL214W 486 nt2.47□□□□□ -2.01
SMD1Q02260 YGR039WYGR039W 312 nt2.47□□□□□ -2.01
SMD1Q02260 UPF3YGR072W 1164 nt2.47□□□□□ -2.01
SMD1Q02260 CTK2YJL006C 972 nt2.47□□□□□ -2.01
SMD1Q02260 GPX1YKL026C 504 nt2.47□□□□□ -2.01
SMD1Q02260 VMA5YKL080W 1179 nt2.47□□□□□ -2.01
SMD1Q02260 SFH1YLR321C 1281 nt2.47□□□□□ -2.01
SMD1Q02260 HHF1YBR009C 312 nt2.47□□□□□ -2.01
SMD1Q02260 MCA1YOR197W 1299 nt2.47□□□□□ -2.01
SMD1Q02260 YPL168WYPL168W 1293 nt2.47□□□□□ -2.01
SMD1Q02260 YBR090CYBR090C 369 nt2.47□□□□□ -2.01
SMD1Q02260 DPB3YBR278W 606 nt2.47□□□□□ -2.01
SMD1Q02260 YGR237CYGR237C 2358 nt2.47□□□□□ -2.01
SMD1Q02260 RRN6YBL014C 2685 nt2.47□□□□□ -2.01
SMD1Q02260 YHR080CYHR080C 4038 nt2.47□□□□□ -2.01
SMD1Q02260 BUD4YJR092W 4344 nt2.47□□□□□ -2.01
SMD1Q02260 VPS9YML097C 1356 nt2.47□□□□□ -2.01
SMD1Q02260 JEN1YKL217W 1851 nt2.46□□□□□ -2.02
SMD1Q02260 ATP16YDL004W 483 nt2.46□□□□□ -2.02
SMD1Q02260 TVP15YDR100W 432 nt2.46□□□□□ -2.02
SMD1Q02260 SMX2YFL017W-A 234 nt2.46□□□□□ -2.02
SMD1Q02260 MIG2YGL209W 1149 nt2.46□□□□□ -2.02
SMD1Q02260 YGR283CYGR283C 1026 nt2.46□□□□□ -2.02
SMD1Q02260 PAU13YHL046C 363 nt2.46□□□□□ -2.02
SMD1Q02260 RPC25YKL144C 639 nt2.46□□□□□ -2.02
SMD1Q02260 RPN13YLR421C 471 nt2.46□□□□□ -2.02
SMD1Q02260 RAD33YML011C 534 nt2.46□□□□□ -2.02
SMD1Q02260 ERG2YMR202W 669 nt2.46□□□□□ -2.02
SMD1Q02260 YNL276CYNL276C 396 nt2.46□□□□□ -2.02
SMD1Q02260 MGE1YOR232W 687 nt2.46□□□□□ -2.02
SMD1Q02260 CIN2YPL241C 807 nt2.46□□□□□ -2.02
SMD1Q02260 VPS17YOR132W 1656 nt2.46□□□□□ -2.02
SMD1Q02260 IRC3YDR332W 2070 nt2.46□□□□□ -2.02
SMD1Q02260 YJL049WYJL049W 1353 nt2.46□□□□□ -2.02
SMD1Q02260 PIG2YIL045W 1617 nt2.46□□□□□ -2.02
SMD1Q02260 TSC11YER093C 4293 nt2.45□□□□□ -2.02
SMD1Q02260 RTT109YLL002W 1311 nt2.45□□□□□ -2.02
SMD1Q02260 HRD1YOL013C 1656 nt2.45□□□□□ -2.02
SMD1Q02260 AIM11YER093C-A 414 nt2.45□□□□□ -2.02
SMD1Q02260 RPS8BYER102W 603 nt2.45□□□□□ -2.02
SMD1Q02260 YHL002C-AYHL002C-A 489 nt2.45□□□□□ -2.02
SMD1Q02260 BCD1YHR040W 1101 nt2.45□□□□□ -2.02
SMD1Q02260 YKL065W-AYKL065W-A 222 nt2.45□□□□□ -2.02
SMD1Q02260 RPS30AYLR287C-A 192 nt2.45□□□□□ -2.02
SMD1Q02260 IMP1YMR150C 573 nt2.45□□□□□ -2.02
SMD1Q02260 RPS8AYBL072C 603 nt2.45□□□□□ -2.02
SMD1Q02260 MER1YNL210W 813 nt2.45□□□□□ -2.02
SMD1Q02260 RET3YPL010W 570 nt2.45□□□□□ -2.02
SMD1Q02260 TAO3YIL129C 7131 nt2.45□□□□□ -2.02
SMD1Q02260 DUN1YDL101C 1542 nt2.45□□□□□ -2.02
SMD1Q02260 APC5YOR249C 2058 nt2.45□□□□□ -2.02
SMD1Q02260 ATP25YMR098C 1839 nt2.45□□□□□ -2.02
SMD1Q02260 RPN6YDL097C 1305 nt2.44□□□□□ -2.02
SMD1Q02260 YDL176WYDL176W 2127 nt2.44□□□□□ -2.02
SMD1Q02260 ARG5,6YER069W 2592 nt2.44□□□□□ -2.02
SMD1Q02260 ERP3YDL018C 678 nt2.44□□□□□ -2.02
SMD1Q02260 YDL050CYDL050C 372 nt2.44□□□□□ -2.02
SMD1Q02260 ARF1YDL192W 546 nt2.44□□□□□ -2.02
SMD1Q02260 MIX14YDR031W 366 nt2.44□□□□□ -2.02
SMD1Q02260 ATC1YDR184C 885 nt2.44□□□□□ -2.02
SMD1Q02260 RPL1BYGL135W 654 nt2.44□□□□□ -2.02
SMD1Q02260 GTR2YGR163W 1026 nt2.44□□□□□ -2.02
SMD1Q02260 IGO2YHR132W-A 396 nt2.44□□□□□ -2.02
SMD1Q02260 ERG20YJL167W 1059 nt2.44□□□□□ -2.02
SMD1Q02260 TMA19YKL056C 504 nt2.44□□□□□ -2.02
SMD1Q02260 YKL091CYKL091C 933 nt2.44□□□□□ -2.02
SMD1Q02260 YKL156C-AYKL156C-A 117 nt2.44□□□□□ -2.02
SMD1Q02260 YLR416CYLR416C 399 nt2.44□□□□□ -2.02
SMD1Q02260 YBL010CYBL010C 843 nt2.44□□□□□ -2.02
SMD1Q02260 SRL1YOR247W 633 nt2.44□□□□□ -2.02
SMD1Q02260 RPL1AYPL220W 654 nt2.44□□□□□ -2.02
SMD1Q02260 YPR053CYPR053C 456 nt2.44□□□□□ -2.02
SMD1Q02260 RFC5YBR087W 1065 nt2.44□□□□□ -2.02
SMD1Q02260 UBP5YER144C 2418 nt2.44□□□□□ -2.02
SMD1Q02260 YAT2YER024W 2772 nt2.44□□□□□ -2.02
SMD1Q02260 PKH1YDR490C 2301 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 21 ms