Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H3AP68431 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
HIST1H3AP68431 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H3AP68431 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H3AP68431 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H3AP68431 IRS3P-201ENST00000223076 1006 ntBASIC18.5■□□□□ 0.55
HIST1H3AP68431 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
HIST1H3AP68431 AC105265.2-201ENST00000467189 838 ntBASIC18.5■□□□□ 0.55
HIST1H3AP68431 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.5■□□□□ 0.55
HIST1H3AP68431 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H3AP68431 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HIST1H3AP68431 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H3AP68431 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H3AP68431 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H3AP68431 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.5■□□□□ 0.55
HIST1H3AP68431 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H3AP68431 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HIST1H3AP68431 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HIST1H3AP68431 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
HIST1H3AP68431 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H3AP68431 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H3AP68431 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H3AP68431 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H3AP68431 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H3AP68431 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H3AP68431 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H3AP68431 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H3AP68431 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H3AP68431 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H3AP68431 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H3AP68431 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.49■□□□□ 0.55
HIST1H3AP68431 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H3AP68431 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.49■□□□□ 0.55
HIST1H3AP68431 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H3AP68431 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H3AP68431 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HIST1H3AP68431 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HIST1H3AP68431 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HIST1H3AP68431 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.48■□□□□ 0.55
HIST1H3AP68431 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.48■□□□□ 0.55
HIST1H3AP68431 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H3AP68431 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H3AP68431 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.48■□□□□ 0.55
HIST1H3AP68431 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H3AP68431 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.48■□□□□ 0.55
HIST1H3AP68431 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H3AP68431 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H3AP68431 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.48■□□□□ 0.55
HIST1H3AP68431 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H3AP68431 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.48■□□□□ 0.55
HIST1H3AP68431 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H3AP68431 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H3AP68431 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.47■□□□□ 0.55
HIST1H3AP68431 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H3AP68431 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H3AP68431 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HIST1H3AP68431 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HIST1H3AP68431 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST1H3AP68431 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.47■□□□□ 0.55
HIST1H3AP68431 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST1H3AP68431 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.47■□□□□ 0.55
HIST1H3AP68431 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H3AP68431 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H3AP68431 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST1H3AP68431 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H3AP68431 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.47■□□□□ 0.55
HIST1H3AP68431 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H3AP68431 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HIST1H3AP68431 AL024507.2-201ENST00000606070 2574 ntBASIC18.46■□□□□ 0.55
HIST1H3AP68431 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H3AP68431 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H3AP68431 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
HIST1H3AP68431 AC005229.4-201ENST00000610085 2198 ntBASIC18.46■□□□□ 0.55
HIST1H3AP68431 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.46■□□□□ 0.55
HIST1H3AP68431 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.46■□□□□ 0.55
HIST1H3AP68431 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.46■□□□□ 0.55
HIST1H3AP68431 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H3AP68431 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.46■□□□□ 0.55
HIST1H3AP68431 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H3AP68431 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H3AP68431 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.45■□□□□ 0.54
HIST1H3AP68431 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.45■□□□□ 0.54
HIST1H3AP68431 AC027612.3-201ENST00000413684 1047 ntBASIC18.45■□□□□ 0.54
HIST1H3AP68431 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H3AP68431 EEF1DP3-203ENST00000566025 782 ntBASIC18.45■□□□□ 0.54
HIST1H3AP68431 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H3AP68431 MIR6084-201ENST00000622012 110 ntBASIC18.45■□□□□ 0.54
HIST1H3AP68431 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H3AP68431 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.45■□□□□ 0.54
HIST1H3AP68431 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.45■□□□□ 0.54
HIST1H3AP68431 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms