Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN6P56747 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDN6P56747 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN6P56747 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN6P56747 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CLDN6P56747 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.36■□□□□ 0.85
CLDN6P56747 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN6P56747 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.36■□□□□ 0.85
CLDN6P56747 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN6P56747 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN6P56747 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN6P56747 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDN6P56747 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN6P56747 AC010980.2-201ENST00000587099 1412 ntBASIC20.36■□□□□ 0.85
CLDN6P56747 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN6P56747 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN6P56747 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN6P56747 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN6P56747 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN6P56747 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN6P56747 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN6P56747 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN6P56747 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN6P56747 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN6P56747 UNC93B4-201ENST00000505679 747 ntBASIC20.35■□□□□ 0.85
CLDN6P56747 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN6P56747 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.35■□□□□ 0.85
CLDN6P56747 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN6P56747 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
CLDN6P56747 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN6P56747 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.35■□□□□ 0.85
CLDN6P56747 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN6P56747 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN6P56747 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN6P56747 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN6P56747 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN6P56747 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN6P56747 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN6P56747 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN6P56747 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CLDN6P56747 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN6P56747 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.34■□□□□ 0.85
CLDN6P56747 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN6P56747 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.34■□□□□ 0.85
CLDN6P56747 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN6P56747 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN6P56747 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN6P56747 AC073648.6-201ENST00000641589 218 ntBASIC20.34■□□□□ 0.85
CLDN6P56747 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN6P56747 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN6P56747 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN6P56747 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN6P56747 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN6P56747 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN6P56747 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN6P56747 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN6P56747 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN6P56747 AC092068.2-201ENST00000590491 1708 ntBASIC20.33■□□□□ 0.85
CLDN6P56747 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN6P56747 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
CLDN6P56747 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN6P56747 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN6P56747 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.33■□□□□ 0.85
CLDN6P56747 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN6P56747 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CLDN6P56747 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.33■□□□□ 0.85
CLDN6P56747 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN6P56747 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.33■□□□□ 0.85
CLDN6P56747 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN6P56747 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN6P56747 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.33■□□□□ 0.84
CLDN6P56747 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN6P56747 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN6P56747 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDN6P56747 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.32■□□□□ 0.84
CLDN6P56747 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN6P56747 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLDN6P56747 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN6P56747 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN6P56747 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN6P56747 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN6P56747 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN6P56747 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN6P56747 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN6P56747 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CLDN6P56747 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN6P56747 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN6P56747 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN6P56747 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms