Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2JP52435 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2JP52435 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2JP52435 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2JP52435 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
POLR2JP52435 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.19■□□□□ 0.82
POLR2JP52435 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 SERBP1P1-201ENST00000396021 1160 ntBASIC20.19■□□□□ 0.82
POLR2JP52435 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.19■□□□□ 0.82
POLR2JP52435 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.19■□□□□ 0.82
POLR2JP52435 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR2JP52435 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.19■□□□□ 0.82
POLR2JP52435 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.18■□□□□ 0.82
POLR2JP52435 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2JP52435 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2JP52435 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2JP52435 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.18■□□□□ 0.82
POLR2JP52435 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2JP52435 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.18■□□□□ 0.82
POLR2JP52435 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2JP52435 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.18■□□□□ 0.82
POLR2JP52435 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
POLR2JP52435 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2JP52435 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2JP52435 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR2JP52435 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.18■□□□□ 0.82
POLR2JP52435 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2JP52435 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2JP52435 SYT6-210ENST00000641643 1587 ntBASIC20.17■□□□□ 0.82
POLR2JP52435 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2JP52435 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2JP52435 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2JP52435 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.17■□□□□ 0.82
POLR2JP52435 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.17■□□□□ 0.82
POLR2JP52435 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2JP52435 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2JP52435 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2JP52435 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2JP52435 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.17■□□□□ 0.82
POLR2JP52435 AP006587.3-201ENST00000525742 1516 ntBASIC20.17■□□□□ 0.82
POLR2JP52435 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2JP52435 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR2JP52435 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.16■□□□□ 0.82
POLR2JP52435 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 SLC47A1P1-202ENST00000449666 945 ntBASIC20.16■□□□□ 0.82
POLR2JP52435 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
POLR2JP52435 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
POLR2JP52435 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR2JP52435 DUX4L19-201ENST00000557448 1267 ntBASIC20.16■□□□□ 0.82
POLR2JP52435 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR2JP52435 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR2JP52435 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
POLR2JP52435 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POLR2JP52435 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
POLR2JP52435 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
POLR2JP52435 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
POLR2JP52435 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR2JP52435 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR2JP52435 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.15■□□□□ 0.82
POLR2JP52435 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
POLR2JP52435 AC136469.2-201ENST00000623944 1028 ntBASIC20.15■□□□□ 0.82
POLR2JP52435 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.15■□□□□ 0.82
POLR2JP52435 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.15■□□□□ 0.82
POLR2JP52435 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
POLR2JP52435 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
POLR2JP52435 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.15■□□□□ 0.82
POLR2JP52435 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR2JP52435 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
POLR2JP52435 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR2JP52435 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
POLR2JP52435 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2JP52435 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.14■□□□□ 0.81
POLR2JP52435 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2JP52435 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.14■□□□□ 0.81
POLR2JP52435 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.14■□□□□ 0.81
POLR2JP52435 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2JP52435 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms