Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDF5P43026 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDF5P43026 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDF5P43026 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDF5P43026 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDF5P43026 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDF5P43026 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDF5P43026 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDF5P43026 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDF5P43026 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.59■□□□□ 0.89
GDF5P43026 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GDF5P43026 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
GDF5P43026 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GDF5P43026 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.58■□□□□ 0.89
GDF5P43026 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GDF5P43026 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.58■□□□□ 0.89
GDF5P43026 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.58■□□□□ 0.89
GDF5P43026 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
GDF5P43026 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GDF5P43026 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GDF5P43026 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
GDF5P43026 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.58■□□□□ 0.88
GDF5P43026 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GDF5P43026 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GDF5P43026 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GDF5P43026 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GDF5P43026 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDF5P43026 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.57■□□□□ 0.88
GDF5P43026 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
GDF5P43026 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.57■□□□□ 0.88
GDF5P43026 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDF5P43026 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
GDF5P43026 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GDF5P43026 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDF5P43026 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GDF5P43026 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF5P43026 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF5P43026 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF5P43026 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GDF5P43026 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.56■□□□□ 0.88
GDF5P43026 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GDF5P43026 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF5P43026 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GDF5P43026 IRS3P-201ENST00000223076 1006 ntBASIC20.56■□□□□ 0.88
GDF5P43026 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GDF5P43026 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.56■□□□□ 0.88
GDF5P43026 AL354811.1-201ENST00000610286 706 ntBASIC20.56■□□□□ 0.88
GDF5P43026 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
GDF5P43026 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
GDF5P43026 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GDF5P43026 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.56■□□□□ 0.88
GDF5P43026 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF5P43026 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF5P43026 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF5P43026 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF5P43026 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF5P43026 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF5P43026 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.55■□□□□ 0.88
GDF5P43026 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF5P43026 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.55■□□□□ 0.88
GDF5P43026 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.55■□□□□ 0.88
GDF5P43026 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.55■□□□□ 0.88
GDF5P43026 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF5P43026 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.55■□□□□ 0.88
GDF5P43026 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF5P43026 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF5P43026 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF5P43026 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GDF5P43026 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF5P43026 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GDF5P43026 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF5P43026 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF5P43026 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.54■□□□□ 0.88
GDF5P43026 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.54■□□□□ 0.88
GDF5P43026 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.54■□□□□ 0.88
GDF5P43026 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDF5P43026 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
GDF5P43026 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GDF5P43026 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF5P43026 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.54■□□□□ 0.88
GDF5P43026 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDF5P43026 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDF5P43026 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.54■□□□□ 0.88
GDF5P43026 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.54■□□□□ 0.88
GDF5P43026 AL358852.1-201ENST00000623174 1268 ntBASIC20.54■□□□□ 0.88
GDF5P43026 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF5P43026 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GDF5P43026 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.54■□□□□ 0.88
GDF5P43026 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF5P43026 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.53■□□□□ 0.88
GDF5P43026 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDF5P43026 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
GDF5P43026 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDF5P43026 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDF5P43026 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.53■□□□□ 0.88
GDF5P43026 TPRG1LP1-201ENST00000598702 760 ntBASIC20.53■□□□□ 0.88
GDF5P43026 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDF5P43026 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDF5P43026 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDF5P43026 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms