Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.33■□□□□ 0.84
CCKBRP32239 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCKBRP32239 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCKBRP32239 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCKBRP32239 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCKBRP32239 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.32■□□□□ 0.84
CCKBRP32239 AC069236.1-201ENST00000604339 616 ntBASIC20.32■□□□□ 0.84
CCKBRP32239 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.32■□□□□ 0.84
CCKBRP32239 AC008694.1-202ENST00000636953 945 ntBASIC20.32■□□□□ 0.84
CCKBRP32239 AC066615.1-201ENST00000640911 628 ntBASIC20.32■□□□□ 0.84
CCKBRP32239 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCKBRP32239 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.32■□□□□ 0.84
CCKBRP32239 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCKBRP32239 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.32■□□□□ 0.84
CCKBRP32239 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCKBRP32239 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCKBRP32239 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.31■□□□□ 0.84
CCKBRP32239 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCKBRP32239 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCKBRP32239 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCKBRP32239 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCKBRP32239 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.31■□□□□ 0.84
CCKBRP32239 POU5F1P4-201ENST00000413175 1085 ntBASIC20.31■□□□□ 0.84
CCKBRP32239 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCKBRP32239 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.31■□□□□ 0.84
CCKBRP32239 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCKBRP32239 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.31■□□□□ 0.84
CCKBRP32239 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CCKBRP32239 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.31■□□□□ 0.84
CCKBRP32239 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCKBRP32239 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCKBRP32239 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCKBRP32239 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCKBRP32239 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCKBRP32239 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCKBRP32239 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCKBRP32239 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.3■□□□□ 0.84
CCKBRP32239 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCKBRP32239 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCKBRP32239 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.3■□□□□ 0.84
CCKBRP32239 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCKBRP32239 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CCKBRP32239 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCKBRP32239 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCKBRP32239 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCKBRP32239 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.3■□□□□ 0.84
CCKBRP32239 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.3■□□□□ 0.84
CCKBRP32239 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCKBRP32239 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.3■□□□□ 0.84
CCKBRP32239 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.3■□□□□ 0.84
CCKBRP32239 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCKBRP32239 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCKBRP32239 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCKBRP32239 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCKBRP32239 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCKBRP32239 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCKBRP32239 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCKBRP32239 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCKBRP32239 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCKBRP32239 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCKBRP32239 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCKBRP32239 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCKBRP32239 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.29■□□□□ 0.84
CCKBRP32239 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.29■□□□□ 0.84
CCKBRP32239 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.29■□□□□ 0.84
CCKBRP32239 AC092118.2-201ENST00000613495 667 ntBASIC20.29■□□□□ 0.84
CCKBRP32239 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.29■□□□□ 0.84
CCKBRP32239 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCKBRP32239 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.29■□□□□ 0.84
CCKBRP32239 AC137767.1-201ENST00000602918 1920 ntBASIC20.29■□□□□ 0.84
CCKBRP32239 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCKBRP32239 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.28■□□□□ 0.84
CCKBRP32239 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.28■□□□□ 0.84
CCKBRP32239 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.28■□□□□ 0.84
CCKBRP32239 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.28■□□□□ 0.84
CCKBRP32239 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.28■□□□□ 0.84
CCKBRP32239 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.28■□□□□ 0.84
CCKBRP32239 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.28■□□□□ 0.84
CCKBRP32239 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.28■□□□□ 0.84
CCKBRP32239 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.28■□□□□ 0.84
CCKBRP32239 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCKBRP32239 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCKBRP32239 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCKBRP32239 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCKBRP32239 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCKBRP32239 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.27■□□□□ 0.84
CCKBRP32239 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms