Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.92■□□□□ 0.62
SDHAP31040 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.92■□□□□ 0.62
SDHAP31040 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.92■□□□□ 0.62
SDHAP31040 AL049796.1-201ENST00000565336 1766 ntBASIC18.92■□□□□ 0.62
SDHAP31040 EDA-201ENST00000338901 1233 ntBASIC18.92■□□□□ 0.62
SDHAP31040 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.92■□□□□ 0.62
SDHAP31040 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SDHAP31040 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
SDHAP31040 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.92■□□□□ 0.62
SDHAP31040 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.92■□□□□ 0.62
SDHAP31040 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.92■□□□□ 0.62
SDHAP31040 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.92■□□□□ 0.62
SDHAP31040 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SDHAP31040 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAP31040 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAP31040 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SDHAP31040 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.91■□□□□ 0.62
SDHAP31040 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAP31040 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.91■□□□□ 0.62
SDHAP31040 SLC25A24-204ENST00000569674 2357 ntBASIC18.91■□□□□ 0.62
SDHAP31040 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAP31040 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.91■□□□□ 0.62
SDHAP31040 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAP31040 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAP31040 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAP31040 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.91■□□□□ 0.62
SDHAP31040 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAP31040 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
SDHAP31040 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.91■□□□□ 0.62
SDHAP31040 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.91■□□□□ 0.62
SDHAP31040 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SDHAP31040 TSPY26P-201ENST00000476365 1326 ntBASIC18.91■□□□□ 0.62
SDHAP31040 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAP31040 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAP31040 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHAP31040 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.91■□□□□ 0.62
SDHAP31040 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.91■□□□□ 0.62
SDHAP31040 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.91■□□□□ 0.62
SDHAP31040 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.9■□□□□ 0.62
SDHAP31040 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SDHAP31040 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SDHAP31040 AP001330.3-201ENST00000520123 633 ntBASIC18.9■□□□□ 0.62
SDHAP31040 AC105233.4-201ENST00000642045 216 ntBASIC18.9■□□□□ 0.62
SDHAP31040 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.9■□□□□ 0.62
SDHAP31040 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHAP31040 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SDHAP31040 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SDHAP31040 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SDHAP31040 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAP31040 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAP31040 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.89■□□□□ 0.61
SDHAP31040 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAP31040 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAP31040 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.89■□□□□ 0.61
SDHAP31040 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAP31040 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.89■□□□□ 0.61
SDHAP31040 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SDHAP31040 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAP31040 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAP31040 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAP31040 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SDHAP31040 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.89■□□□□ 0.61
SDHAP31040 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAP31040 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.89■□□□□ 0.61
SDHAP31040 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHAP31040 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAP31040 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAP31040 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.88■□□□□ 0.61
SDHAP31040 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SDHAP31040 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAP31040 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAP31040 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.88■□□□□ 0.61
SDHAP31040 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SDHAP31040 AL355001.2-201ENST00000620617 1191 ntBASIC18.88■□□□□ 0.61
SDHAP31040 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SDHAP31040 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms