Protein–RNA interactions for Protein: P27352

GIF, Gastric intrinsic factor, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GIFP27352 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GIFP27352 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.71■□□□□ 0.59
GIFP27352 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.71■□□□□ 0.59
GIFP27352 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GIFP27352 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GIFP27352 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.71■□□□□ 0.59
GIFP27352 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
GIFP27352 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.71■□□□□ 0.59
GIFP27352 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GIFP27352 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GIFP27352 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GIFP27352 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GIFP27352 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GIFP27352 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GIFP27352 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GIFP27352 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GIFP27352 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
GIFP27352 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GIFP27352 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
GIFP27352 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
GIFP27352 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GIFP27352 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.7■□□□□ 0.58
GIFP27352 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.7■□□□□ 0.58
GIFP27352 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.7■□□□□ 0.58
GIFP27352 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.7■□□□□ 0.58
GIFP27352 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.7■□□□□ 0.58
GIFP27352 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.7■□□□□ 0.58
GIFP27352 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
GIFP27352 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GIFP27352 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
GIFP27352 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.7■□□□□ 0.58
GIFP27352 TSPY26P-201ENST00000476365 1326 ntBASIC18.7■□□□□ 0.58
GIFP27352 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GIFP27352 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GIFP27352 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GIFP27352 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
GIFP27352 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GIFP27352 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GIFP27352 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
GIFP27352 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.69■□□□□ 0.58
GIFP27352 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GIFP27352 OR2I1P-207ENST00000453522 948 ntBASIC18.69■□□□□ 0.58
GIFP27352 IGHV3-19-201ENST00000521488 291 ntBASIC18.69■□□□□ 0.58
GIFP27352 AC144652.1-201ENST00000609974 1624 ntBASIC18.69■□□□□ 0.58
GIFP27352 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GIFP27352 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GIFP27352 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GIFP27352 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GIFP27352 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.68■□□□□ 0.58
GIFP27352 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.68■□□□□ 0.58
GIFP27352 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GIFP27352 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GIFP27352 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GIFP27352 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GIFP27352 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GIFP27352 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.68■□□□□ 0.58
GIFP27352 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.68■□□□□ 0.58
GIFP27352 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.68■□□□□ 0.58
GIFP27352 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GIFP27352 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GIFP27352 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.68■□□□□ 0.58
GIFP27352 LINC01529-204ENST00000636474 1715 ntBASIC18.68■□□□□ 0.58
GIFP27352 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GIFP27352 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GIFP27352 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GIFP27352 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GIFP27352 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GIFP27352 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GIFP27352 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GIFP27352 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.67■□□□□ 0.58
GIFP27352 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GIFP27352 AL162430.1-201ENST00000480705 870 ntBASIC18.67■□□□□ 0.58
GIFP27352 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.67■□□□□ 0.58
GIFP27352 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.67■□□□□ 0.58
GIFP27352 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.67■□□□□ 0.58
GIFP27352 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GIFP27352 AL358852.1-201ENST00000623174 1268 ntBASIC18.67■□□□□ 0.58
GIFP27352 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GIFP27352 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GIFP27352 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GIFP27352 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GIFP27352 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
GIFP27352 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.67■□□□□ 0.58
GIFP27352 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GIFP27352 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GIFP27352 AF106564.1-201ENST00000607058 2553 ntBASIC18.67■□□□□ 0.58
GIFP27352 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GIFP27352 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GIFP27352 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GIFP27352 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
GIFP27352 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GIFP27352 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GIFP27352 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GIFP27352 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GIFP27352 MIR572-201ENST00000384983 95 ntBASIC18.66■□□□□ 0.58
GIFP27352 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GIFP27352 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GIFP27352 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GIFP27352 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GIFP27352 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms