Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PTPN3P26045 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.59■■□□□ 1.05
PTPN3P26045 AF106564.1-201ENST00000607058 2553 ntBASIC21.59■■□□□ 1.05
PTPN3P26045 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.59■■□□□ 1.05
PTPN3P26045 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.58■■□□□ 1.05
PTPN3P26045 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN3P26045 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.58■■□□□ 1.05
PTPN3P26045 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN3P26045 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
PTPN3P26045 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PTPN3P26045 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.57■■□□□ 1.04
PTPN3P26045 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN3P26045 AL024507.2-201ENST00000606070 2574 ntBASIC21.57■■□□□ 1.04
PTPN3P26045 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN3P26045 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN3P26045 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN3P26045 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN3P26045 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN3P26045 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.57■■□□□ 1.04
PTPN3P26045 AC027612.3-201ENST00000413684 1047 ntBASIC21.57■■□□□ 1.04
PTPN3P26045 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
PTPN3P26045 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN3P26045 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN3P26045 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.56■■□□□ 1.04
PTPN3P26045 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PTPN3P26045 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN3P26045 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.56■■□□□ 1.04
PTPN3P26045 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.56■■□□□ 1.04
PTPN3P26045 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.56■■□□□ 1.04
PTPN3P26045 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN3P26045 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN3P26045 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.56■■□□□ 1.04
PTPN3P26045 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.56■■□□□ 1.04
PTPN3P26045 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN3P26045 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN3P26045 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN3P26045 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.56■■□□□ 1.04
PTPN3P26045 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.55■■□□□ 1.04
PTPN3P26045 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN3P26045 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN3P26045 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN3P26045 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.55■■□□□ 1.04
PTPN3P26045 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN3P26045 ZNRF2P3-201ENST00000424200 374 ntBASIC21.55■■□□□ 1.04
PTPN3P26045 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.55■■□□□ 1.04
PTPN3P26045 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.55■■□□□ 1.04
PTPN3P26045 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.55■■□□□ 1.04
PTPN3P26045 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN3P26045 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.55■■□□□ 1.04
PTPN3P26045 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN3P26045 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PTPN3P26045 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN3P26045 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.54■■□□□ 1.04
PTPN3P26045 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PTPN3P26045 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN3P26045 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN3P26045 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN3P26045 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN3P26045 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN3P26045 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.54■■□□□ 1.04
PTPN3P26045 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.54■■□□□ 1.04
PTPN3P26045 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN3P26045 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN3P26045 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPN3P26045 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN3P26045 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN3P26045 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPN3P26045 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN3P26045 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PTPN3P26045 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN3P26045 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN3P26045 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.53■■□□□ 1.04
PTPN3P26045 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN3P26045 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PTPN3P26045 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN3P26045 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPN3P26045 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN3P26045 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN3P26045 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN3P26045 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN3P26045 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PTPN3P26045 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.52■■□□□ 1.04
PTPN3P26045 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PTPN3P26045 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PTPN3P26045 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.52■■□□□ 1.04
PTPN3P26045 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.52■■□□□ 1.04
PTPN3P26045 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.52■■□□□ 1.04
PTPN3P26045 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN3P26045 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms