Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRKCAP17252 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PRKCAP17252 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRKCAP17252 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.5■□□□□ 0.71
PRKCAP17252 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.5■□□□□ 0.71
PRKCAP17252 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PRKCAP17252 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PRKCAP17252 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.5■□□□□ 0.71
PRKCAP17252 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.5■□□□□ 0.71
PRKCAP17252 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.5■□□□□ 0.71
PRKCAP17252 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.5■□□□□ 0.71
PRKCAP17252 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.5■□□□□ 0.71
PRKCAP17252 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRKCAP17252 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRKCAP17252 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRKCAP17252 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.5■□□□□ 0.71
PRKCAP17252 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.5■□□□□ 0.71
PRKCAP17252 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRKCAP17252 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.5■□□□□ 0.71
PRKCAP17252 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.5■□□□□ 0.71
PRKCAP17252 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRKCAP17252 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRKCAP17252 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.49■□□□□ 0.71
PRKCAP17252 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRKCAP17252 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PRKCAP17252 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PRKCAP17252 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.49■□□□□ 0.71
PRKCAP17252 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.49■□□□□ 0.71
PRKCAP17252 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.49■□□□□ 0.71
PRKCAP17252 FAM99A-202ENST00000538190 1989 ntBASIC19.49■□□□□ 0.71
PRKCAP17252 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRKCAP17252 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRKCAP17252 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRKCAP17252 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PRKCAP17252 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.48■□□□□ 0.71
PRKCAP17252 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.48■□□□□ 0.71
PRKCAP17252 BX005040.4-201ENST00000637145 1518 ntBASIC19.48■□□□□ 0.71
PRKCAP17252 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.48■□□□□ 0.71
PRKCAP17252 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.48■□□□□ 0.71
PRKCAP17252 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCAP17252 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCAP17252 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.47■□□□□ 0.71
PRKCAP17252 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCAP17252 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCAP17252 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCAP17252 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.47■□□□□ 0.71
PRKCAP17252 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCAP17252 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.47■□□□□ 0.71
PRKCAP17252 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCAP17252 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCAP17252 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCAP17252 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PRKCAP17252 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCAP17252 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PRKCAP17252 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PRKCAP17252 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PRKCAP17252 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PRKCAP17252 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PRKCAP17252 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PRKCAP17252 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.46■□□□□ 0.71
PRKCAP17252 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.46■□□□□ 0.71
PRKCAP17252 MIR6084-201ENST00000622012 110 ntBASIC19.46■□□□□ 0.71
PRKCAP17252 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.46■□□□□ 0.71
PRKCAP17252 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
PRKCAP17252 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCAP17252 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCAP17252 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
PRKCAP17252 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCAP17252 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
PRKCAP17252 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCAP17252 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
PRKCAP17252 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.45■□□□□ 0.7
PRKCAP17252 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.45■□□□□ 0.7
PRKCAP17252 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCAP17252 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms