Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.25■■□□□ 1.79
COL11A2P13942 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.24■■□□□ 1.79
COL11A2P13942 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.24■■□□□ 1.79
COL11A2P13942 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL11A2P13942 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
COL11A2P13942 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL11A2P13942 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.24■■□□□ 1.79
COL11A2P13942 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.24■■□□□ 1.79
COL11A2P13942 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.24■■□□□ 1.79
COL11A2P13942 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.24■■□□□ 1.79
COL11A2P13942 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL11A2P13942 AL591742.1-201ENST00000604433 565 ntBASIC26.23■■□□□ 1.79
COL11A2P13942 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL11A2P13942 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.23■■□□□ 1.79
COL11A2P13942 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL11A2P13942 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL11A2P13942 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL11A2P13942 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.22■■□□□ 1.79
COL11A2P13942 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL11A2P13942 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.22■■□□□ 1.79
COL11A2P13942 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.22■■□□□ 1.79
COL11A2P13942 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
COL11A2P13942 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC26.22■■□□□ 1.79
COL11A2P13942 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.22■■□□□ 1.79
COL11A2P13942 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL11A2P13942 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.21■■□□□ 1.79
COL11A2P13942 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.21■■□□□ 1.79
COL11A2P13942 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL11A2P13942 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.21■■□□□ 1.79
COL11A2P13942 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
COL11A2P13942 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
COL11A2P13942 AC233263.1-201ENST00000578059 224 ntBASIC26.2■■□□□ 1.79
COL11A2P13942 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
COL11A2P13942 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL11A2P13942 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL11A2P13942 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL11A2P13942 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.2■■□□□ 1.78
COL11A2P13942 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL11A2P13942 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
COL11A2P13942 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL11A2P13942 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.19■■□□□ 1.78
COL11A2P13942 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL11A2P13942 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL11A2P13942 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.19■■□□□ 1.78
COL11A2P13942 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.19■■□□□ 1.78
COL11A2P13942 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL11A2P13942 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.19■■□□□ 1.78
COL11A2P13942 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL11A2P13942 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
COL11A2P13942 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A2P13942 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.18■■□□□ 1.78
COL11A2P13942 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A2P13942 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A2P13942 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
COL11A2P13942 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A2P13942 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A2P13942 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
COL11A2P13942 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.18■■□□□ 1.78
COL11A2P13942 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A2P13942 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL11A2P13942 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.17■■□□□ 1.78
COL11A2P13942 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.17■■□□□ 1.78
COL11A2P13942 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A2P13942 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A2P13942 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A2P13942 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A2P13942 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A2P13942 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.17■■□□□ 1.78
COL11A2P13942 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.17■■□□□ 1.78
COL11A2P13942 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.17■■□□□ 1.78
COL11A2P13942 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
COL11A2P13942 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A2P13942 AC137767.1-201ENST00000602918 1920 ntBASIC26.17■■□□□ 1.78
COL11A2P13942 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A2P13942 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A2P13942 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.17■■□□□ 1.78
COL11A2P13942 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL11A2P13942 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.17■■□□□ 1.78
COL11A2P13942 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.16■■□□□ 1.78
COL11A2P13942 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.16■■□□□ 1.78
COL11A2P13942 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.16■■□□□ 1.78
COL11A2P13942 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.16■■□□□ 1.78
COL11A2P13942 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL11A2P13942 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.16■■□□□ 1.78
COL11A2P13942 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.16■■□□□ 1.78
COL11A2P13942 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.16■■□□□ 1.78
COL11A2P13942 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.16■■□□□ 1.78
COL11A2P13942 AC069544.1-201ENST00000609399 999 ntBASIC26.16■■□□□ 1.78
COL11A2P13942 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
COL11A2P13942 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
COL11A2P13942 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.16■■□□□ 1.78
COL11A2P13942 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL11A2P13942 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.15■■□□□ 1.78
COL11A2P13942 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL11A2P13942 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
COL11A2P13942 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL11A2P13942 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
COL11A2P13942 PNMA6B-201ENST00000538162 1200 ntBASIC26.15■■□□□ 1.78
COL11A2P13942 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.15■■□□□ 1.78
COL11A2P13942 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms