Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 MIR4466-201ENST00000606121 54 ntBASIC20.35■□□□□ 0.85
LINGO3P0C6S8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 FEM1AP1-201ENST00000431297 1995 ntBASIC20.35■□□□□ 0.85
LINGO3P0C6S8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.35■□□□□ 0.85
LINGO3P0C6S8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINGO3P0C6S8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINGO3P0C6S8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.34■□□□□ 0.85
LINGO3P0C6S8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINGO3P0C6S8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.34■□□□□ 0.85
LINGO3P0C6S8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINGO3P0C6S8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.34■□□□□ 0.85
LINGO3P0C6S8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.34■□□□□ 0.85
LINGO3P0C6S8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINGO3P0C6S8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.34■□□□□ 0.85
LINGO3P0C6S8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.34■□□□□ 0.85
LINGO3P0C6S8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LINGO3P0C6S8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.33■□□□□ 0.85
LINGO3P0C6S8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LINGO3P0C6S8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.33■□□□□ 0.85
LINGO3P0C6S8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LINGO3P0C6S8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LINGO3P0C6S8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.33■□□□□ 0.85
LINGO3P0C6S8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LINGO3P0C6S8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LINGO3P0C6S8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.33■□□□□ 0.84
LINGO3P0C6S8 FEM1AP4-201ENST00000443167 1987 ntBASIC20.33■□□□□ 0.84
LINGO3P0C6S8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
LINGO3P0C6S8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.33■□□□□ 0.84
LINGO3P0C6S8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINGO3P0C6S8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.33■□□□□ 0.84
LINGO3P0C6S8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.33■□□□□ 0.84
LINGO3P0C6S8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINGO3P0C6S8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 DUX4L4-201ENST00000566884 1269 ntBASIC20.31■□□□□ 0.84
LINGO3P0C6S8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
LINGO3P0C6S8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.3■□□□□ 0.84
LINGO3P0C6S8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINGO3P0C6S8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.29■□□□□ 0.84
LINGO3P0C6S8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINGO3P0C6S8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINGO3P0C6S8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINGO3P0C6S8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINGO3P0C6S8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.29■□□□□ 0.84
LINGO3P0C6S8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINGO3P0C6S8 SRD5A1P1-201ENST00000442297 786 ntBASIC20.29■□□□□ 0.84
LINGO3P0C6S8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINGO3P0C6S8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.29■□□□□ 0.84
LINGO3P0C6S8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms