Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 TERF1P5-201ENST00000477545 1207 ntBASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 AC133552.2-202ENST00000575694 574 ntBASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 AC008175.2-201ENST00000612840 297 ntBASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 AC120498.10-201ENST00000621827 505 ntBASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 SLC29A4P1-201ENST00000398760 971 ntBASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 GUSBP6-202ENST00000438529 1198 ntBASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 AF201337.1-201ENST00000520239 748 ntBASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 AC139530.1-201ENST00000575312 1977 ntBASIC19.94■□□□□ 0.78
RAB40ALP0C0E4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 POU5F1P4-201ENST00000413175 1085 ntBASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 AC007322.4-201ENST00000509611 723 ntBASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40ALP0C0E4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
RAB40ALP0C0E4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40ALP0C0E4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.9■□□□□ 0.78
RAB40ALP0C0E4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms