Protein–RNA interactions for Protein: P07358

C8B, Complement component C8 beta chain, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C8BP07358 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
C8BP07358 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
C8BP07358 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
C8BP07358 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
C8BP07358 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.08■□□□□ 0.81
C8BP07358 AC079089.2-201ENST00000531211 1277 ntBASIC20.08■□□□□ 0.81
C8BP07358 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
C8BP07358 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
C8BP07358 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
C8BP07358 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
C8BP07358 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
C8BP07358 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
C8BP07358 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.08■□□□□ 0.8
C8BP07358 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
C8BP07358 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.07■□□□□ 0.8
C8BP07358 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.07■□□□□ 0.8
C8BP07358 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.07■□□□□ 0.8
C8BP07358 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.07■□□□□ 0.8
C8BP07358 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
C8BP07358 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.07■□□□□ 0.8
C8BP07358 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.07■□□□□ 0.8
C8BP07358 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
C8BP07358 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C8BP07358 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.06■□□□□ 0.8
C8BP07358 KRT16P3-201ENST00000439127 1283 ntBASIC20.06■□□□□ 0.8
C8BP07358 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.06■□□□□ 0.8
C8BP07358 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.06■□□□□ 0.8
C8BP07358 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C8BP07358 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C8BP07358 AL031602.1-201ENST00000633169 911 ntBASIC20.06■□□□□ 0.8
C8BP07358 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C8BP07358 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
C8BP07358 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.06■□□□□ 0.8
C8BP07358 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C8BP07358 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C8BP07358 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C8BP07358 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
C8BP07358 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.05■□□□□ 0.8
C8BP07358 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.05■□□□□ 0.8
C8BP07358 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.05■□□□□ 0.8
C8BP07358 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C8BP07358 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.05■□□□□ 0.8
C8BP07358 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.05■□□□□ 0.8
C8BP07358 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.05■□□□□ 0.8
C8BP07358 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.05■□□□□ 0.8
C8BP07358 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.05■□□□□ 0.8
C8BP07358 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C8BP07358 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C8BP07358 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.05■□□□□ 0.8
C8BP07358 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.05■□□□□ 0.8
C8BP07358 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C8BP07358 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
C8BP07358 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C8BP07358 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.04■□□□□ 0.8
C8BP07358 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
C8BP07358 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
C8BP07358 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.04■□□□□ 0.8
C8BP07358 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C8BP07358 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
C8BP07358 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
C8BP07358 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C8BP07358 AC133637.1-201ENST00000624115 1537 ntBASIC20.04■□□□□ 0.8
C8BP07358 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.04■□□□□ 0.8
C8BP07358 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C8BP07358 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.04■□□□□ 0.8
C8BP07358 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.04■□□□□ 0.8
C8BP07358 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C8BP07358 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
C8BP07358 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C8BP07358 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C8BP07358 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C8BP07358 AC073314.1-201ENST00000568729 2216 ntBASIC20.03■□□□□ 0.8
C8BP07358 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C8BP07358 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
C8BP07358 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C8BP07358 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.03■□□□□ 0.8
C8BP07358 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C8BP07358 AL356740.2-201ENST00000601559 647 ntBASIC20.03■□□□□ 0.8
C8BP07358 AC092666.2-201ENST00000613287 246 ntBASIC20.03■□□□□ 0.8
C8BP07358 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
C8BP07358 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C8BP07358 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C8BP07358 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C8BP07358 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C8BP07358 AL391422.3-201ENST00000603791 2761 ntBASIC20.03■□□□□ 0.8
C8BP07358 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C8BP07358 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C8BP07358 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.03■□□□□ 0.8
C8BP07358 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms