Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GYPBP06028 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GYPBP06028 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GYPBP06028 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GYPBP06028 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GYPBP06028 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GYPBP06028 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.94■□□□□ 0.62
GYPBP06028 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
GYPBP06028 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GYPBP06028 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GYPBP06028 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GYPBP06028 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.94■□□□□ 0.62
GYPBP06028 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GYPBP06028 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.94■□□□□ 0.62
GYPBP06028 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.94■□□□□ 0.62
GYPBP06028 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GYPBP06028 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GYPBP06028 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
GYPBP06028 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GYPBP06028 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GYPBP06028 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
GYPBP06028 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GYPBP06028 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.94■□□□□ 0.62
GYPBP06028 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GYPBP06028 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.93■□□□□ 0.62
GYPBP06028 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.93■□□□□ 0.62
GYPBP06028 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GYPBP06028 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GYPBP06028 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.93■□□□□ 0.62
GYPBP06028 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GYPBP06028 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GYPBP06028 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GYPBP06028 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GYPBP06028 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GYPBP06028 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GYPBP06028 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GYPBP06028 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.93■□□□□ 0.62
GYPBP06028 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.93■□□□□ 0.62
GYPBP06028 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GYPBP06028 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
GYPBP06028 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GYPBP06028 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GYPBP06028 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GYPBP06028 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.92■□□□□ 0.62
GYPBP06028 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GYPBP06028 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.92■□□□□ 0.62
GYPBP06028 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
GYPBP06028 AL049796.1-201ENST00000565336 1766 ntBASIC18.92■□□□□ 0.62
GYPBP06028 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GYPBP06028 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
GYPBP06028 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
GYPBP06028 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
GYPBP06028 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.92■□□□□ 0.62
GYPBP06028 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GYPBP06028 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.92■□□□□ 0.62
GYPBP06028 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.92■□□□□ 0.62
GYPBP06028 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GYPBP06028 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.92■□□□□ 0.62
GYPBP06028 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GYPBP06028 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GYPBP06028 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
GYPBP06028 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
GYPBP06028 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GYPBP06028 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GYPBP06028 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GYPBP06028 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GYPBP06028 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GYPBP06028 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GYPBP06028 AP006587.3-201ENST00000525742 1516 ntBASIC18.91■□□□□ 0.62
GYPBP06028 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GYPBP06028 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.91■□□□□ 0.62
GYPBP06028 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.91■□□□□ 0.62
GYPBP06028 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.91■□□□□ 0.62
GYPBP06028 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GYPBP06028 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GYPBP06028 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GYPBP06028 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GYPBP06028 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.9■□□□□ 0.62
GYPBP06028 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.9■□□□□ 0.62
GYPBP06028 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
GYPBP06028 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.9■□□□□ 0.62
GYPBP06028 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.9■□□□□ 0.62
GYPBP06028 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.9■□□□□ 0.62
GYPBP06028 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.9■□□□□ 0.62
GYPBP06028 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GYPBP06028 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms