Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO1P00395 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.66■■□□□ 1.06
MT-CO1P00395 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
MT-CO1P00395 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO1P00395 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO1P00395 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.66■■□□□ 1.06
MT-CO1P00395 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.66■■□□□ 1.06
MT-CO1P00395 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.66■■□□□ 1.06
MT-CO1P00395 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.66■■□□□ 1.06
MT-CO1P00395 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.66■■□□□ 1.06
MT-CO1P00395 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO1P00395 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO1P00395 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO1P00395 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO1P00395 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO1P00395 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO1P00395 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO1P00395 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-CO1P00395 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
MT-CO1P00395 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.66■■□□□ 1.06
MT-CO1P00395 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
MT-CO1P00395 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-CO1P00395 FAM99A-202ENST00000538190 1989 ntBASIC21.65■■□□□ 1.06
MT-CO1P00395 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-CO1P00395 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.65■■□□□ 1.06
MT-CO1P00395 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MT-CO1P00395 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
MT-CO1P00395 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.65■■□□□ 1.06
MT-CO1P00395 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.65■■□□□ 1.06
MT-CO1P00395 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-CO1P00395 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MT-CO1P00395 ECEL1P1-201ENST00000373592 1742 ntBASIC21.65■■□□□ 1.06
MT-CO1P00395 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.65■■□□□ 1.06
MT-CO1P00395 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MT-CO1P00395 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MT-CO1P00395 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.65■■□□□ 1.06
MT-CO1P00395 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-CO1P00395 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
MT-CO1P00395 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MT-CO1P00395 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
MT-CO1P00395 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
MT-CO1P00395 AC016769.1-201ENST00000409132 1010 ntBASIC21.64■■□□□ 1.05
MT-CO1P00395 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.64■■□□□ 1.05
MT-CO1P00395 AP001160.3-201ENST00000601484 763 ntBASIC21.64■■□□□ 1.05
MT-CO1P00395 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MT-CO1P00395 PKD1P6-201ENST00000343738 4769 ntBASIC21.64■■□□□ 1.05
MT-CO1P00395 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
MT-CO1P00395 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MT-CO1P00395 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MT-CO1P00395 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MT-CO1P00395 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MT-CO1P00395 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.63■■□□□ 1.05
MT-CO1P00395 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.63■■□□□ 1.05
MT-CO1P00395 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
MT-CO1P00395 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
MT-CO1P00395 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MT-CO1P00395 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.63■■□□□ 1.05
MT-CO1P00395 EEF1DP3-203ENST00000566025 782 ntBASIC21.63■■□□□ 1.05
MT-CO1P00395 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
MT-CO1P00395 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MT-CO1P00395 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.63■■□□□ 1.05
MT-CO1P00395 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MT-CO1P00395 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MT-CO1P00395 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MT-CO1P00395 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MT-CO1P00395 AC010542.4-201ENST00000563151 1910 ntBASIC21.63■■□□□ 1.05
MT-CO1P00395 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.62■■□□□ 1.05
MT-CO1P00395 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-CO1P00395 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-CO1P00395 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-CO1P00395 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MT-CO1P00395 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MT-CO1P00395 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.62■■□□□ 1.05
MT-CO1P00395 RARRES2P11-201ENST00000635158 484 ntBASIC21.62■■□□□ 1.05
MT-CO1P00395 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MT-CO1P00395 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.62■■□□□ 1.05
MT-CO1P00395 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MT-CO1P00395 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-CO1P00395 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-CO1P00395 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-CO1P00395 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-CO1P00395 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
MT-CO1P00395 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-CO1P00395 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
MT-CO1P00395 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-CO1P00395 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MT-CO1P00395 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MT-CO1P00395 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.61■■□□□ 1.05
MT-CO1P00395 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.61■■□□□ 1.05
MT-CO1P00395 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.61■■□□□ 1.05
MT-CO1P00395 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
MT-CO1P00395 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
MT-CO1P00395 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-CO1P00395 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-CO1P00395 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-CO1P00395 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-CO1P00395 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
MT-CO1P00395 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
MT-CO1P00395 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-CO1P00395 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms