Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.85■□□□□ 0.77
CLPTM1O96005 TSPY9P-201ENST00000440215 945 ntBASIC19.85■□□□□ 0.77
CLPTM1O96005 TSPY11P-201ENST00000442607 1045 ntBASIC19.85■□□□□ 0.77
CLPTM1O96005 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.85■□□□□ 0.77
CLPTM1O96005 AC092028.1-203ENST00000608262 953 ntBASIC19.85■□□□□ 0.77
CLPTM1O96005 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.85■□□□□ 0.77
CLPTM1O96005 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLPTM1O96005 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLPTM1O96005 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1O96005 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1O96005 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1O96005 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CLPTM1O96005 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CLPTM1O96005 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.84■□□□□ 0.77
CLPTM1O96005 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1O96005 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1O96005 AC131274.2-201ENST00000580697 1507 ntBASIC19.84■□□□□ 0.77
CLPTM1O96005 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1O96005 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLPTM1O96005 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1O96005 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.84■□□□□ 0.77
CLPTM1O96005 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1O96005 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CLPTM1O96005 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPTM1O96005 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPTM1O96005 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPTM1O96005 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CLPTM1O96005 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.83■□□□□ 0.77
CLPTM1O96005 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CLPTM1O96005 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.83■□□□□ 0.77
CLPTM1O96005 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.83■□□□□ 0.77
CLPTM1O96005 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CLPTM1O96005 GABARAPL3-202ENST00000624044 1851 ntBASIC19.83■□□□□ 0.76
CLPTM1O96005 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.83■□□□□ 0.76
CLPTM1O96005 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1O96005 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1O96005 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CLPTM1O96005 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CLPTM1O96005 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1O96005 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1O96005 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1O96005 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1O96005 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLPTM1O96005 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLPTM1O96005 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
CLPTM1O96005 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
CLPTM1O96005 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.82■□□□□ 0.76
CLPTM1O96005 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.82■□□□□ 0.76
CLPTM1O96005 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.82■□□□□ 0.76
CLPTM1O96005 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 UNC93B8-201ENST00000511903 705 ntBASIC19.82■□□□□ 0.76
CLPTM1O96005 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CLPTM1O96005 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLPTM1O96005 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.82■□□□□ 0.76
CLPTM1O96005 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPTM1O96005 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLPTM1O96005 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CLPTM1O96005 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1O96005 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1O96005 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1O96005 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.81■□□□□ 0.76
CLPTM1O96005 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.81■□□□□ 0.76
CLPTM1O96005 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.81■□□□□ 0.76
CLPTM1O96005 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLPTM1O96005 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1O96005 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.81■□□□□ 0.76
CLPTM1O96005 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.81■□□□□ 0.76
CLPTM1O96005 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLPTM1O96005 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.81■□□□□ 0.76
CLPTM1O96005 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CLPTM1O96005 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1O96005 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPTM1O96005 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLPTM1O96005 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CLPTM1O96005 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.8■□□□□ 0.76
CLPTM1O96005 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CLPTM1O96005 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPTM1O96005 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPTM1O96005 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPTM1O96005 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1O96005 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1O96005 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
CLPTM1O96005 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLPTM1O96005 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms