Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE6O95741 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE6O95741 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE6O95741 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.73■□□□□ 0.91
CPNE6O95741 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE6O95741 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE6O95741 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
CPNE6O95741 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.72■□□□□ 0.91
CPNE6O95741 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE6O95741 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE6O95741 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CPNE6O95741 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.72■□□□□ 0.91
CPNE6O95741 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.72■□□□□ 0.91
CPNE6O95741 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.72■□□□□ 0.91
CPNE6O95741 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.72■□□□□ 0.91
CPNE6O95741 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CPNE6O95741 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE6O95741 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.72■□□□□ 0.91
CPNE6O95741 AC055733.4-201ENST00000638462 1354 ntBASIC20.72■□□□□ 0.91
CPNE6O95741 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE6O95741 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.71■□□□□ 0.91
CPNE6O95741 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE6O95741 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE6O95741 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CPNE6O95741 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE6O95741 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.71■□□□□ 0.91
CPNE6O95741 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.71■□□□□ 0.91
CPNE6O95741 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE6O95741 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.71■□□□□ 0.91
CPNE6O95741 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.71■□□□□ 0.91
CPNE6O95741 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.71■□□□□ 0.91
CPNE6O95741 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.71■□□□□ 0.91
CPNE6O95741 MFSD11-216ENST00000590393 1141 ntBASIC20.71■□□□□ 0.91
CPNE6O95741 AC104771.1-201ENST00000603335 964 ntBASIC20.71■□□□□ 0.91
CPNE6O95741 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.71■□□□□ 0.91
CPNE6O95741 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE6O95741 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE6O95741 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE6O95741 AP004607.7-201ENST00000527152 1677 ntBASIC20.7■□□□□ 0.91
CPNE6O95741 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CPNE6O95741 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE6O95741 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.7■□□□□ 0.9
CPNE6O95741 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.7■□□□□ 0.9
CPNE6O95741 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE6O95741 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE6O95741 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE6O95741 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE6O95741 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.7■□□□□ 0.9
CPNE6O95741 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE6O95741 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.7■□□□□ 0.9
CPNE6O95741 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.7■□□□□ 0.9
CPNE6O95741 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE6O95741 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE6O95741 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CPNE6O95741 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CPNE6O95741 OR7E47P-201ENST00000546390 1422 ntBASIC20.7■□□□□ 0.9
CPNE6O95741 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE6O95741 AL121603.2-201ENST00000557373 2117 ntBASIC20.69■□□□□ 0.9
CPNE6O95741 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CPNE6O95741 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE6O95741 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CPNE6O95741 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE6O95741 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.69■□□□□ 0.9
CPNE6O95741 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE6O95741 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE6O95741 MIR663A-201ENST00000385250 93 ntBASIC20.69■□□□□ 0.9
CPNE6O95741 NCF1B-203ENST00000435988 1254 ntBASIC20.69■□□□□ 0.9
CPNE6O95741 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.69■□□□□ 0.9
CPNE6O95741 AL109923.1-201ENST00000618799 583 ntBASIC20.69■□□□□ 0.9
CPNE6O95741 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE6O95741 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE6O95741 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE6O95741 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CPNE6O95741 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE6O95741 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE6O95741 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE6O95741 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CPNE6O95741 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.68■□□□□ 0.9
CPNE6O95741 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.68■□□□□ 0.9
CPNE6O95741 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE6O95741 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE6O95741 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.68■□□□□ 0.9
CPNE6O95741 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.68■□□□□ 0.9
CPNE6O95741 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.68■□□□□ 0.9
CPNE6O95741 AL034346.1-201ENST00000568244 1277 ntBASIC20.68■□□□□ 0.9
CPNE6O95741 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE6O95741 AP001160.3-201ENST00000601484 763 ntBASIC20.68■□□□□ 0.9
CPNE6O95741 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE6O95741 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE6O95741 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE6O95741 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE6O95741 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.67■□□□□ 0.9
CPNE6O95741 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.67■□□□□ 0.9
CPNE6O95741 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.67■□□□□ 0.9
CPNE6O95741 UBE2DNL-204ENST00000602536 740 ntBASIC20.67■□□□□ 0.9
CPNE6O95741 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CPNE6O95741 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE6O95741 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE6O95741 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE6O95741 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms