Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
PCF11O94913 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
PCF11O94913 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
PCF11O94913 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC33.27■■■□□ 2.92
PCF11O94913 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC33.27■■■□□ 2.92
PCF11O94913 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC33.27■■■□□ 2.92
PCF11O94913 FAM99A-202ENST00000538190 1989 ntBASIC33.26■■■□□ 2.92
PCF11O94913 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC33.26■■■□□ 2.92
PCF11O94913 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
PCF11O94913 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
PCF11O94913 OR10C1-204ENST00000622521 1039 ntBASIC33.26■■■□□ 2.92
PCF11O94913 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC33.26■■■□□ 2.92
PCF11O94913 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
PCF11O94913 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
PCF11O94913 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
PCF11O94913 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
PCF11O94913 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC33.26■■■□□ 2.91
PCF11O94913 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC33.26■■■□□ 2.91
PCF11O94913 AC243732.1-201ENST00000612648 864 ntBASIC33.26■■■□□ 2.91
PCF11O94913 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC33.25■■■□□ 2.91
PCF11O94913 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC33.25■■■□□ 2.91
PCF11O94913 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC33.25■■■□□ 2.91
PCF11O94913 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
PCF11O94913 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC33.25■■■□□ 2.91
PCF11O94913 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
PCF11O94913 ITM2C-210ENST00000620962 501 ntBASIC33.25■■■□□ 2.91
PCF11O94913 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC33.25■■■□□ 2.91
PCF11O94913 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC33.25■■■□□ 2.91
PCF11O94913 C9orf163-202ENST00000624034 2573 ntBASIC33.25■■■□□ 2.91
PCF11O94913 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
PCF11O94913 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
PCF11O94913 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC33.24■■■□□ 2.91
PCF11O94913 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
PCF11O94913 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
PCF11O94913 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
PCF11O94913 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
PCF11O94913 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
PCF11O94913 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
PCF11O94913 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
PCF11O94913 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
PCF11O94913 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
PCF11O94913 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC33.23■■■□□ 2.91
PCF11O94913 MIPEPP3-201ENST00000412105 444 ntBASIC33.23■■■□□ 2.91
PCF11O94913 RGMA-211ENST00000557420 989 ntTSL 3 BASIC33.23■■■□□ 2.91
PCF11O94913 AC092118.2-201ENST00000613495 667 ntBASIC33.23■■■□□ 2.91
PCF11O94913 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
PCF11O94913 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
PCF11O94913 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
PCF11O94913 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC33.22■■■□□ 2.91
PCF11O94913 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
PCF11O94913 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC33.22■■■□□ 2.91
PCF11O94913 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
PCF11O94913 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC33.22■■■□□ 2.91
PCF11O94913 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC33.22■■■□□ 2.91
PCF11O94913 ME2-208ENST00000638937 2471 ntTSL 5 BASIC33.22■■■□□ 2.91
PCF11O94913 CD44-222ENST00000526025 1052 ntTSL 2 BASIC33.21■■■□□ 2.91
PCF11O94913 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC33.21■■■□□ 2.91
PCF11O94913 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
PCF11O94913 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC33.21■■■□□ 2.91
PCF11O94913 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC33.21■■■□□ 2.91
PCF11O94913 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC33.21■■■□□ 2.91
PCF11O94913 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
PCF11O94913 PPP1R14BP2-201ENST00000426284 444 ntBASIC33.21■■■□□ 2.91
PCF11O94913 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC33.21■■■□□ 2.91
PCF11O94913 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC33.21■■■□□ 2.91
PCF11O94913 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
PCF11O94913 AC069236.1-201ENST00000604339 616 ntBASIC33.21■■■□□ 2.91
PCF11O94913 MYC-209ENST00000641252 345 ntBASIC33.21■■■□□ 2.91
PCF11O94913 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
PCF11O94913 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC33.2■■■□□ 2.91
PCF11O94913 CASK-201ENST00000378154 2494 ntTSL 5 BASIC33.2■■■□□ 2.91
PCF11O94913 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
PCF11O94913 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
PCF11O94913 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC33.2■■■□□ 2.91
PCF11O94913 AL162412.1-201ENST00000567129 965 ntBASIC33.2■■■□□ 2.91
PCF11O94913 AC120498.10-201ENST00000621827 505 ntBASIC33.2■■■□□ 2.91
PCF11O94913 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
PCF11O94913 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC33.19■■■□□ 2.9
PCF11O94913 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
PCF11O94913 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC33.19■■■□□ 2.9
PCF11O94913 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC33.19■■■□□ 2.9
PCF11O94913 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
PCF11O94913 AC092053.2-201ENST00000640557 1818 ntBASIC33.19■■■□□ 2.9
PCF11O94913 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
PCF11O94913 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC33.19■■■□□ 2.9
PCF11O94913 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC33.19■■■□□ 2.9
PCF11O94913 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
PCF11O94913 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC33.18■■■□□ 2.9
PCF11O94913 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
PCF11O94913 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
PCF11O94913 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
PCF11O94913 RPS2P52-201ENST00000469610 820 ntBASIC33.17■■■□□ 2.9
PCF11O94913 AC133041.1-202ENST00000642053 222 ntBASIC33.17■■■□□ 2.9
PCF11O94913 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
PCF11O94913 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC33.17■■■□□ 2.9
PCF11O94913 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC33.17■■■□□ 2.9
PCF11O94913 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC33.17■■■□□ 2.9
PCF11O94913 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
PCF11O94913 ISCU-212ENST00000547005 795 ntTSL 3 BASIC33.17■■■□□ 2.9
PCF11O94913 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC33.16■■■□□ 2.9
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms