Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.86■■□□□ 1.89
CACNA1FO60840 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CACNA1FO60840 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CACNA1FO60840 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CACNA1FO60840 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.86■■□□□ 1.89
CACNA1FO60840 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CACNA1FO60840 AC026185.1-201ENST00000445748 174 ntBASIC26.86■■□□□ 1.89
CACNA1FO60840 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.86■■□□□ 1.89
CACNA1FO60840 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CACNA1FO60840 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CACNA1FO60840 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CACNA1FO60840 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CACNA1FO60840 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.85■■□□□ 1.89
CACNA1FO60840 SLC7A5P1-201ENST00000568957 537 ntBASIC26.85■■□□□ 1.89
CACNA1FO60840 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.85■■□□□ 1.89
CACNA1FO60840 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CACNA1FO60840 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
CACNA1FO60840 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.85■■□□□ 1.89
CACNA1FO60840 EP400NL-214ENST00000641289 2402 ntBASIC26.85■■□□□ 1.89
CACNA1FO60840 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CACNA1FO60840 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.84■■□□□ 1.89
CACNA1FO60840 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CACNA1FO60840 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.84■■□□□ 1.89
CACNA1FO60840 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.84■■□□□ 1.89
CACNA1FO60840 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CACNA1FO60840 AC231657.2-201ENST00000624556 255 ntBASIC26.84■■□□□ 1.89
CACNA1FO60840 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.84■■□□□ 1.89
CACNA1FO60840 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CACNA1FO60840 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CACNA1FO60840 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CACNA1FO60840 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CACNA1FO60840 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CACNA1FO60840 RBM17P2-201ENST00000616397 1405 ntBASIC26.83■■□□□ 1.89
CACNA1FO60840 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CACNA1FO60840 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CACNA1FO60840 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.83■■□□□ 1.88
CACNA1FO60840 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
CACNA1FO60840 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
CACNA1FO60840 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
CACNA1FO60840 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.82■■□□□ 1.88
CACNA1FO60840 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
CACNA1FO60840 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CACNA1FO60840 AC010536.3-201ENST00000620306 533 ntBASIC26.82■■□□□ 1.88
CACNA1FO60840 AC120498.10-201ENST00000621827 505 ntBASIC26.82■■□□□ 1.88
CACNA1FO60840 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CACNA1FO60840 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CACNA1FO60840 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.82■■□□□ 1.88
CACNA1FO60840 CDCA4P2-201ENST00000441182 718 ntBASIC26.82■■□□□ 1.88
CACNA1FO60840 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
CACNA1FO60840 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CACNA1FO60840 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CACNA1FO60840 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CACNA1FO60840 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.82■■□□□ 1.88
CACNA1FO60840 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CACNA1FO60840 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.81■■□□□ 1.88
CACNA1FO60840 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CACNA1FO60840 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CACNA1FO60840 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CACNA1FO60840 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CACNA1FO60840 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CACNA1FO60840 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.81■■□□□ 1.88
CACNA1FO60840 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CACNA1FO60840 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.81■■□□□ 1.88
CACNA1FO60840 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CACNA1FO60840 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.81■■□□□ 1.88
CACNA1FO60840 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.81■■□□□ 1.88
CACNA1FO60840 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CACNA1FO60840 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CACNA1FO60840 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.8■■□□□ 1.88
CACNA1FO60840 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.8■■□□□ 1.88
CACNA1FO60840 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.8■■□□□ 1.88
CACNA1FO60840 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CACNA1FO60840 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.8■■□□□ 1.88
CACNA1FO60840 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CACNA1FO60840 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CACNA1FO60840 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.8■■□□□ 1.88
CACNA1FO60840 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.8■■□□□ 1.88
CACNA1FO60840 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CACNA1FO60840 METTL15-202ENST00000403099 795 ntTSL 5 BASIC26.8■■□□□ 1.88
CACNA1FO60840 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.8■■□□□ 1.88
CACNA1FO60840 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.8■■□□□ 1.88
CACNA1FO60840 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.8■■□□□ 1.88
CACNA1FO60840 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.8■■□□□ 1.88
CACNA1FO60840 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
CACNA1FO60840 AC243732.1-201ENST00000612648 864 ntBASIC26.8■■□□□ 1.88
CACNA1FO60840 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.8■■□□□ 1.88
CACNA1FO60840 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.8■■□□□ 1.88
CACNA1FO60840 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CACNA1FO60840 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.79■■□□□ 1.88
CACNA1FO60840 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.79■■□□□ 1.88
CACNA1FO60840 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
CACNA1FO60840 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CACNA1FO60840 AC244015.2-201ENST00000616358 1861 ntBASIC26.79■■□□□ 1.88
CACNA1FO60840 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CACNA1FO60840 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.79■■□□□ 1.88
CACNA1FO60840 PARP1-210ENST00000629232 477 ntTSL 5 BASIC26.79■■□□□ 1.88
CACNA1FO60840 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.79■■□□□ 1.88
CACNA1FO60840 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.79■■□□□ 1.88
CACNA1FO60840 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CACNA1FO60840 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms