Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXD2O60548 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
FOXD2O60548 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXD2O60548 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXD2O60548 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXD2O60548 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXD2O60548 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXD2O60548 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXD2O60548 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXD2O60548 TERF1P5-201ENST00000477545 1207 ntBASIC21.24■□□□□ 0.99
FOXD2O60548 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.24■□□□□ 0.99
FOXD2O60548 AC138907.5-202ENST00000569484 235 ntBASIC21.24■□□□□ 0.99
FOXD2O60548 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
FOXD2O60548 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXD2O60548 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
FOXD2O60548 AC233723.2-201ENST00000623798 2106 ntBASIC21.23■□□□□ 0.99
FOXD2O60548 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
FOXD2O60548 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXD2O60548 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXD2O60548 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXD2O60548 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXD2O60548 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
FOXD2O60548 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.23■□□□□ 0.99
FOXD2O60548 CYP2T1P-201ENST00000432607 1285 ntBASIC21.23■□□□□ 0.99
FOXD2O60548 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXD2O60548 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXD2O60548 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
FOXD2O60548 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXD2O60548 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXD2O60548 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXD2O60548 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXD2O60548 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXD2O60548 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXD2O60548 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXD2O60548 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.22■□□□□ 0.99
FOXD2O60548 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXD2O60548 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.22■□□□□ 0.99
FOXD2O60548 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXD2O60548 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.22■□□□□ 0.99
FOXD2O60548 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.22■□□□□ 0.99
FOXD2O60548 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.22■□□□□ 0.99
FOXD2O60548 AC006058.3-201ENST00000606217 1069 ntBASIC21.22■□□□□ 0.99
FOXD2O60548 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXD2O60548 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXD2O60548 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.22■□□□□ 0.99
FOXD2O60548 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXD2O60548 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
FOXD2O60548 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
FOXD2O60548 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXD2O60548 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
FOXD2O60548 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXD2O60548 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXD2O60548 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
FOXD2O60548 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
FOXD2O60548 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXD2O60548 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXD2O60548 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXD2O60548 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXD2O60548 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXD2O60548 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXD2O60548 UNC93B4-201ENST00000505679 747 ntBASIC21.21■□□□□ 0.99
FOXD2O60548 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.21■□□□□ 0.99
FOXD2O60548 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXD2O60548 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXD2O60548 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
FOXD2O60548 AC068338.2-201ENST00000563278 1430 ntBASIC21.21■□□□□ 0.99
FOXD2O60548 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD2O60548 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
FOXD2O60548 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
FOXD2O60548 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXD2O60548 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXD2O60548 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD2O60548 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.2■□□□□ 0.98
FOXD2O60548 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXD2O60548 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXD2O60548 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXD2O60548 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXD2O60548 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD2O60548 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXD2O60548 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD2O60548 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD2O60548 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD2O60548 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD2O60548 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD2O60548 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXD2O60548 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD2O60548 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.19■□□□□ 0.98
FOXD2O60548 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD2O60548 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXD2O60548 UBE2SP1-201ENST00000450587 669 ntBASIC21.19■□□□□ 0.98
FOXD2O60548 AC128676.1-201ENST00000454392 318 ntBASIC21.19■□□□□ 0.98
FOXD2O60548 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
FOXD2O60548 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.19■□□□□ 0.98
FOXD2O60548 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
FOXD2O60548 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXD2O60548 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXD2O60548 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXD2O60548 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.19■□□□□ 0.98
FOXD2O60548 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.19■□□□□ 0.98
FOXD2O60548 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms