Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6DO43924 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6DO43924 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.38■□□□□ 0.21
PDE6DO43924 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.38■□□□□ 0.21
PDE6DO43924 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6DO43924 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.38■□□□□ 0.21
PDE6DO43924 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PDE6DO43924 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.38■□□□□ 0.21
PDE6DO43924 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6DO43924 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6DO43924 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6DO43924 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PDE6DO43924 AC006128.1-201ENST00000624704 1661 ntBASIC16.38■□□□□ 0.21
PDE6DO43924 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.38■□□□□ 0.21
PDE6DO43924 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6DO43924 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.38■□□□□ 0.21
PDE6DO43924 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6DO43924 GPX1-201ENST00000419349 1106 ntBASIC16.38■□□□□ 0.21
PDE6DO43924 MIR4281-201ENST00000580852 62 ntBASIC16.38■□□□□ 0.21
PDE6DO43924 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PDE6DO43924 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6DO43924 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PDE6DO43924 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PDE6DO43924 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
PDE6DO43924 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.38■□□□□ 0.21
PDE6DO43924 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PDE6DO43924 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
PDE6DO43924 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.38■□□□□ 0.21
PDE6DO43924 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6DO43924 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PDE6DO43924 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6DO43924 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.37■□□□□ 0.21
PDE6DO43924 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6DO43924 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6DO43924 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PDE6DO43924 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6DO43924 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6DO43924 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6DO43924 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6DO43924 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6DO43924 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
PDE6DO43924 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.37■□□□□ 0.21
PDE6DO43924 AC138932.1-201ENST00000534164 6830 ntBASIC16.36■□□□□ 0.21
PDE6DO43924 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
PDE6DO43924 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.36■□□□□ 0.21
PDE6DO43924 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 MIR639-201ENST00000384974 98 ntBASIC16.36■□□□□ 0.21
PDE6DO43924 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.36■□□□□ 0.21
PDE6DO43924 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.36■□□□□ 0.21
PDE6DO43924 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDE6DO43924 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.36■□□□□ 0.21
PDE6DO43924 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6DO43924 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.35■□□□□ 0.21
PDE6DO43924 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.35■□□□□ 0.21
PDE6DO43924 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.35■□□□□ 0.21
PDE6DO43924 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.35■□□□□ 0.21
PDE6DO43924 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 THA1P-201ENST00000590384 1145 ntBASIC16.35■□□□□ 0.21
PDE6DO43924 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PDE6DO43924 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.35■□□□□ 0.21
PDE6DO43924 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.35■□□□□ 0.21
PDE6DO43924 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6DO43924 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.34■□□□□ 0.21
PDE6DO43924 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
PDE6DO43924 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6DO43924 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.34■□□□□ 0.21
PDE6DO43924 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.34■□□□□ 0.21
PDE6DO43924 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6DO43924 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.34■□□□□ 0.21
PDE6DO43924 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.34■□□□□ 0.21
PDE6DO43924 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6DO43924 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms