Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 AC069152.1-201ENST00000438030 544 ntBASIC27.33■■□□□ 1.97
KCNQ3O43525 AC007322.4-201ENST00000509611 723 ntBASIC27.33■■□□□ 1.97
KCNQ3O43525 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC27.33■■□□□ 1.97
KCNQ3O43525 AC008175.2-201ENST00000612840 297 ntBASIC27.33■■□□□ 1.97
KCNQ3O43525 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
KCNQ3O43525 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
KCNQ3O43525 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
KCNQ3O43525 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KCNQ3O43525 SLC29A4P1-201ENST00000398760 971 ntBASIC27.32■■□□□ 1.96
KCNQ3O43525 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC27.32■■□□□ 1.96
KCNQ3O43525 AC016405.3-201ENST00000607710 860 ntBASIC27.32■■□□□ 1.96
KCNQ3O43525 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC27.32■■□□□ 1.96
KCNQ3O43525 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.32■■□□□ 1.96
KCNQ3O43525 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KCNQ3O43525 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC27.32■■□□□ 1.96
KCNQ3O43525 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.32■■□□□ 1.96
KCNQ3O43525 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KCNQ3O43525 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
KCNQ3O43525 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.31■■□□□ 1.96
KCNQ3O43525 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC27.31■■□□□ 1.96
KCNQ3O43525 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC27.31■■□□□ 1.96
KCNQ3O43525 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
KCNQ3O43525 CD99P1-205ENST00000527459 561 ntBASIC27.31■■□□□ 1.96
KCNQ3O43525 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC27.31■■□□□ 1.96
KCNQ3O43525 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.31■■□□□ 1.96
KCNQ3O43525 PFKL-212ENST00000628044 129 ntTSL 3 BASIC27.31■■□□□ 1.96
KCNQ3O43525 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC27.31■■□□□ 1.96
KCNQ3O43525 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
KCNQ3O43525 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
KCNQ3O43525 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
KCNQ3O43525 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
KCNQ3O43525 RBM17P2-201ENST00000616397 1405 ntBASIC27.31■■□□□ 1.96
KCNQ3O43525 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.3■■□□□ 1.96
KCNQ3O43525 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
KCNQ3O43525 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
KCNQ3O43525 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
KCNQ3O43525 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
KCNQ3O43525 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.3■■□□□ 1.96
KCNQ3O43525 POU5F1P4-201ENST00000413175 1085 ntBASIC27.3■■□□□ 1.96
KCNQ3O43525 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
KCNQ3O43525 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.3■■□□□ 1.96
KCNQ3O43525 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
KCNQ3O43525 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.3■■□□□ 1.96
KCNQ3O43525 KRT18P6-201ENST00000555540 1265 ntBASIC27.3■■□□□ 1.96
KCNQ3O43525 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.3■■□□□ 1.96
KCNQ3O43525 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC27.3■■□□□ 1.96
KCNQ3O43525 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
KCNQ3O43525 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
KCNQ3O43525 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
KCNQ3O43525 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC27.3■■□□□ 1.96
KCNQ3O43525 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
KCNQ3O43525 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
KCNQ3O43525 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNQ3O43525 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC27.29■■□□□ 1.96
KCNQ3O43525 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNQ3O43525 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNQ3O43525 TSPY20P-201ENST00000450910 630 ntBASIC27.29■■□□□ 1.96
KCNQ3O43525 MIR4651-201ENST00000582622 73 ntBASIC27.29■■□□□ 1.96
KCNQ3O43525 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNQ3O43525 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
KCNQ3O43525 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.29■■□□□ 1.96
KCNQ3O43525 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC27.29■■□□□ 1.96
KCNQ3O43525 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNQ3O43525 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC27.28■■□□□ 1.96
KCNQ3O43525 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNQ3O43525 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
KCNQ3O43525 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNQ3O43525 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
KCNQ3O43525 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC27.28■■□□□ 1.96
KCNQ3O43525 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.28■■□□□ 1.96
KCNQ3O43525 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.28■■□□□ 1.96
KCNQ3O43525 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC27.28■■□□□ 1.96
KCNQ3O43525 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNQ3O43525 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KCNQ3O43525 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
KCNQ3O43525 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.27■■□□□ 1.96
KCNQ3O43525 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
KCNQ3O43525 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
KCNQ3O43525 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
KCNQ3O43525 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.27■■□□□ 1.96
KCNQ3O43525 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC27.27■■□□□ 1.96
KCNQ3O43525 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
KCNQ3O43525 MIPEPP3-201ENST00000412105 444 ntBASIC27.27■■□□□ 1.96
KCNQ3O43525 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27.27■■□□□ 1.96
KCNQ3O43525 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.27■■□□□ 1.96
KCNQ3O43525 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC27.27■■□□□ 1.96
KCNQ3O43525 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
KCNQ3O43525 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
KCNQ3O43525 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.96
KCNQ3O43525 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
KCNQ3O43525 FAM99A-202ENST00000538190 1989 ntBASIC27.26■■□□□ 1.95
KCNQ3O43525 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
KCNQ3O43525 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
KCNQ3O43525 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.26■■□□□ 1.95
KCNQ3O43525 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.26■■□□□ 1.95
KCNQ3O43525 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
KCNQ3O43525 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
KCNQ3O43525 KRT16P2-201ENST00000414673 1423 ntBASIC27.25■■□□□ 1.95
KCNQ3O43525 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
KCNQ3O43525 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms