Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK2O00526 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK2O00526 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UPK2O00526 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPK2O00526 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPK2O00526 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.95■□□□□ 0.3
UPK2O00526 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK2O00526 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.95■□□□□ 0.3
UPK2O00526 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.95■□□□□ 0.3
UPK2O00526 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
UPK2O00526 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.95■□□□□ 0.3
UPK2O00526 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK2O00526 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.95■□□□□ 0.3
UPK2O00526 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK2O00526 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK2O00526 AC135279.3-201ENST00000610945 1311 ntBASIC16.95■□□□□ 0.3
UPK2O00526 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.94■□□□□ 0.3
UPK2O00526 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK2O00526 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
UPK2O00526 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
UPK2O00526 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
UPK2O00526 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.94■□□□□ 0.3
UPK2O00526 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
UPK2O00526 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 IGHV3-19-201ENST00000521488 291 ntBASIC16.94■□□□□ 0.3
UPK2O00526 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.94■□□□□ 0.3
UPK2O00526 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK2O00526 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.94■□□□□ 0.3
UPK2O00526 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK2O00526 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK2O00526 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
UPK2O00526 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.93■□□□□ 0.3
UPK2O00526 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.93■□□□□ 0.3
UPK2O00526 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK2O00526 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
UPK2O00526 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK2O00526 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK2O00526 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK2O00526 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK2O00526 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.93■□□□□ 0.3
UPK2O00526 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK2O00526 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK2O00526 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.93■□□□□ 0.3
UPK2O00526 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.93■□□□□ 0.3
UPK2O00526 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.93■□□□□ 0.3
UPK2O00526 AC131212.1-201ENST00000613771 668 ntBASIC16.93■□□□□ 0.3
UPK2O00526 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK2O00526 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK2O00526 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.93■□□□□ 0.3
UPK2O00526 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK2O00526 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK2O00526 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UPK2O00526 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK2O00526 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
UPK2O00526 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK2O00526 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK2O00526 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK2O00526 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
UPK2O00526 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK2O00526 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK2O00526 AC009237.3-201ENST00000393279 1427 ntBASIC16.92■□□□□ 0.3
UPK2O00526 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK2O00526 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK2O00526 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK2O00526 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK2O00526 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.91■□□□□ 0.3
UPK2O00526 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK2O00526 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK2O00526 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.91■□□□□ 0.3
UPK2O00526 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UPK2O00526 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK2O00526 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
UPK2O00526 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.91■□□□□ 0.3
UPK2O00526 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK2O00526 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.91■□□□□ 0.3
UPK2O00526 AC008764.7-201ENST00000593779 1081 ntBASIC16.91■□□□□ 0.3
UPK2O00526 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.91■□□□□ 0.3
UPK2O00526 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.91■□□□□ 0.3
UPK2O00526 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK2O00526 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK2O00526 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK2O00526 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK2O00526 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
UPK2O00526 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK2O00526 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
UPK2O00526 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms